| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2782 |
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| Symbol | |
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| ID | 6462058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2872902 |
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| End bp | 2876198 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728935 |
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| Product | trehalose synthase |
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| Protein accession | YP_002019550 |
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| Protein GI | 194337756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CCGAACCGCT CTGGTACAAA GACGCCATTA TTTATGAGGC GCATGTCAAG
ACGTTCTATG ACAGCAACAA TGATGGTGTT GGAGATTTTC AGGGACTGCG CCAGAAGCTT
GGTTACCTGC AAAGTCTCGG TGTTACTGCC ATCTGGCTGC TTCCCTTTTA TCCATCGCCT
TTACGAGATG ATGGTTACGA TATTGCCGAT TATATGAGTG TCAATCCCGA TTACGGGACG
ATGGAAGATT TCCGGGAGTT TATTGAAGAG GCACACTCTC TTGGTATAAA GGTGATTACC
GAGCTGGTCG TGAACCACAC TTCCGACCAA CATGCCTGGT TCCAGCGTGC CCGGAAGGCT
CCGGCAGGCT CTCCAGAGAG AAACTTCTAT GTCTGGAGTG ACGATTCCAG CAAATATTCT
GAAGCCCGGA TTATTTTCCA GGACTTCGAG GCTTCAAACT GGACATGGGA TCCGGTTGCC
GGGCAATATT TCTGGCATCG CTTCTACCAT CACCAGCCCG ACCTGAACTT TGAAAACCCC
GAAGTACACA AGGCTCTGCT CGGTGTGCTT GATTTCTGGC TTGGCATGGG CGTTGATGGT
CTCCGCCTTG ATGCTGTTCC CTATCTCTAT GAAGAGGAGG GGAGTAACTG CGAAAATTTA
CCGAGGACTT ATGAGTATCT GAGGGCGTTG CGCTCCTATG TGGATGAGCA CTATCCCAAC
CGGATGCTGC TTGCCGAAGC CAACCAGTGG CCTGAAGATT CTGCAGCCTA TTTTGGTACC
GGTGACCTCT GTCACATGAA CTTCCACTTT CCCCTGATGC CGCGCATGTA TATGGCGCTT
GCTACCGAAG ATCGTTTTCC CATTCTCGAT ATTCTGGAAC AGACACCGGA AATTCCGGAG
ATCTGCCAGT GGGCTTCGTT CCTTCGCAAT CATGATGAGC TGACGCTTGA AATGGTTACT
GACGAGGAGC GCGACTACAT GCGCAGGGTC TATGCCAACG ATCCCAAGGC CCGTATCAAT
CTTGGTATCC GCCGCCGTCT TGCACCGCTC ATGGCCAATG ATCGCCGCAA GATTGAACTG
ATGAACATCA TGCTGCTCTC ACTGCCCGGA ACTCCGGTAC TCTACTACGG TGACGAAATT
GGCATGGGCG ATAACTTTTA TCTTGGTGAT CGAGATGGAG TACGTACACC CATGCAGTGG
AACTCTGACC GTAATGCAGG GTTTTCGCGT GCCAATCCCC AGCGGCTGCA GCTCCCGGTC
ATCATCGATC CGGAATATCA TTATGAGGCG GTCAACGTAG AGGTGCAGGA GAGCAATGTC
AACTCCCTGC TCTGGTGGAT GCGCCATACC ATATCAACTG CTCATCGCTA CAAATCGCTC
AGCCGTGGTA CCATTGAGTT CCTGCAGGTG AGCAACCCCA AAGTGCTGAT TTTTATTCGT
CAGTTCGAGG ATGAAACCAT GCTTAGTGTG ATCAACCTCT CAAGAAATGC CCAGGCGGTG
ATGATTGATC TATCCCGCTT TGACGGCTAT ATCCCTGAAG AGGTGTTCAG CATGAACCGT
TTTCCGAAAA TCAGGAAAAT TCCCTACATG GTGGCCCTGG GATCCTATGG ATATTTCTGG
TTGCAGTTGG TCAAGGATAC CGAAAATACG GATGGTCGTC CATACCTCGA CAAACCTTTT
GCGACACCCT CTCGCTGGCA AAGCCTCTTT ACCGGCAAAA GCCGCGAACG GCTTGAAACA
GAGATTCTGC CCCAGTACTT CAAGGTAAGC CGCTGGTTTG GCGGCAAGGT GCGTCATATC
ATGCGTATCT CCATCGTCGA TACCATTCCT GTGGCGGGAA TGGCAAAAGC CAAGTTGCTG
GTTACGGAAG TGCGCTATTC AAGTGGTGAG AATGAACGCT ATCAACTCCC GGTATGCTTT
TCTCCGCTTT CCCTGGTTTC TCTCCAGGAT GATAATTTCT ACAAGCGCGT TATTGCAAGG
GTCGTTATTG GCGATGAAGA GGGTTATCTG TGCGACGCCA CCTTTGATGG GCGTTTCCTG
AACCATCTCT ATCAGCTTGT TACCGGCAAG GAGAGTTGGC AGGGTAAAGA GGGCACTGTT
TCCGGAATGA AGTCCATGAA GATGGATGCT GTTGCGGAAG AGGGAATGGA GCATGAGCCC
CTCCTGATGG GTGTCGAACA ATCGAATACC TCAATTCGCT TCAATAATGA TCTCTGCCTG
AAGCTCTATC GCCGCATTGA AATCGGAATC TCTCCCGAAG TGGAGATGTG CCGTGCGCTG
AGTGAGCATA CTTCGTTCAA AAACCTGCCG GGCTATCTTG GTTCACTGAA CTATGAGCAG
AGTCGCACCA ACGGCTATTC TCTCGGTATT TTGCAGCATT TTGTGAAAAA CGAAGGGGAT
GCCTGGCAGC TTTCGCTTAG TCAGGTGAAA CGCTATTATG ATGATATCCT TGCAAAAATC
AACTCCGGCA TGGTATTGCC TGCGTTGCCG AAACTCAGTG GTGATCCCGT GCAGCTTCCC
GAAATCATGC ATGAACTGAT TGGTGAAGCC TATCTTGGCA TGCTTGAAAA GCTTGCAGAA
CGGACTGCTG AAATGCACCT CTCCCTTGCT TCGCTCGACA GCGATCCGGC ATTTGCGCCA
GAGGCTTTTA CTACACTCTA TCAGCGTTCT ATCTACCAGG CGATGTGCGA ACAGGTGAAG
CGGGCGGTTC TTCTTATCCG TGAAATCATG CATCAGATGG CTCCGGAGCA GCAGCAGCTT
GCATCTCTTT TTGTGCAGAG GCAGAAACAG ATTTTGCAGC AGTTTGATCC CATCAGGATA
GAGAAAATCG ATACACTCAA AATCAGGATT CACGGCGATT TTCATCTTGG CCAGGTACTC
TTTACCGGCA AGGATTTTGT GATTATCGAT TTTGAGGGAG AGCCTGCCCG GCCCCTCTCC
GAACGGAAAA TCAAACGTTC GGTTTTCCGT GATATTTCAG GCATGTTGCG CTCCTTCGAC
TATGCGGCCT TTAATGTGCT GCAGCAGGAC AACACCCTCT TCCGTCCGGA AGAGCGGCTT
GCCCTTGAGC CTTGGGCTGA CCGCTGGAGT TTCTATGCTG GCCAGTACTT TCTCGACAGC
TATTTTGCAA AGACCGGAGG CAGTAATATT GTTCCGGCAG ATCCGAAGCA GCGTGAACAT
CTGATGCGGG CCTATTTGAT GAACAAGGCG GTCTACGAAC TCAATTATGA GCTCAACAAT
CGTCCTGACT GGGCCTCCAT ACCGCTTCGG GGTATTATGA AGATTCTGGA GTCGTAA
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| Protein sequence | MYQPEPLWYK DAIIYEAHVK TFYDSNNDGV GDFQGLRQKL GYLQSLGVTA IWLLPFYPSP
LRDDGYDIAD YMSVNPDYGT MEDFREFIEE AHSLGIKVIT ELVVNHTSDQ HAWFQRARKA
PAGSPERNFY VWSDDSSKYS EARIIFQDFE ASNWTWDPVA GQYFWHRFYH HQPDLNFENP
EVHKALLGVL DFWLGMGVDG LRLDAVPYLY EEEGSNCENL PRTYEYLRAL RSYVDEHYPN
RMLLAEANQW PEDSAAYFGT GDLCHMNFHF PLMPRMYMAL ATEDRFPILD ILEQTPEIPE
ICQWASFLRN HDELTLEMVT DEERDYMRRV YANDPKARIN LGIRRRLAPL MANDRRKIEL
MNIMLLSLPG TPVLYYGDEI GMGDNFYLGD RDGVRTPMQW NSDRNAGFSR ANPQRLQLPV
IIDPEYHYEA VNVEVQESNV NSLLWWMRHT ISTAHRYKSL SRGTIEFLQV SNPKVLIFIR
QFEDETMLSV INLSRNAQAV MIDLSRFDGY IPEEVFSMNR FPKIRKIPYM VALGSYGYFW
LQLVKDTENT DGRPYLDKPF ATPSRWQSLF TGKSRERLET EILPQYFKVS RWFGGKVRHI
MRISIVDTIP VAGMAKAKLL VTEVRYSSGE NERYQLPVCF SPLSLVSLQD DNFYKRVIAR
VVIGDEEGYL CDATFDGRFL NHLYQLVTGK ESWQGKEGTV SGMKSMKMDA VAEEGMEHEP
LLMGVEQSNT SIRFNNDLCL KLYRRIEIGI SPEVEMCRAL SEHTSFKNLP GYLGSLNYEQ
SRTNGYSLGI LQHFVKNEGD AWQLSLSQVK RYYDDILAKI NSGMVLPALP KLSGDPVQLP
EIMHELIGEA YLGMLEKLAE RTAEMHLSLA SLDSDPAFAP EAFTTLYQRS IYQAMCEQVK
RAVLLIREIM HQMAPEQQQL ASLFVQRQKQ ILQQFDPIRI EKIDTLKIRI HGDFHLGQVL
FTGKDFVIID FEGEPARPLS ERKIKRSVFR DISGMLRSFD YAAFNVLQQD NTLFRPEERL
ALEPWADRWS FYAGQYFLDS YFAKTGGSNI VPADPKQREH LMRAYLMNKA VYELNYELNN
RPDWASIPLR GIMKILES
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