| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2724 |
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| Symbol | |
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| ID | 6462634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2816009 |
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| End bp | 2817331 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642728884 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002019499 |
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| Protein GI | 194337705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.190068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT ATAAGGCGTT AATCGGCTTT TGCATGGTGG GCGCTTTGGC CGTTCCTCTC
CAGGCAAATG CTGGCGAGAC CATGAAGCTC TCTCTTTCCG ATGCCATCGC CATGGCCCGT
CAAAACAACT ATACCGTAAA GGCTGCACGA AGCCGGGTTG ATCAGGCTGA GGCAAAAATT
GTCCAGACCC GTCAGTCATT CCTGCCGAAA GTTACGTTGT CGGAGACGCT TGTCTTGACC
AATGACCCTG GGGCGGCATT GGTTTTTAAA TTGCAGCAGA ACACGATAGA GGCATCTGAT
TTTGATCCGG CAAAGTTGAA TAATGCTGAT ATTATCAATG ATTTCAATAC CTCCATTCAG
GTCATGCAGC CGGTTTACAA CGCTGATGCT GCCGTAGGAC GGAATATGGC GATAACGGCC
AAGAAGGCAC AGGAGCATAT GGCTCTTCGC AGTGAGGAGA CTATCGGGCT CCAGGTAAGC
AAAGTCTATT ATGGGTTGAT TCTTGCACGC AAGAATATAG AGGCTGTTGA GAAGTCGATA
ACAACCATGC AGGCACACAG TAACGATGCC GCCAAAGGTT ATCGTGCCGG GTTACTGCCG
AAGTCTGACA AGCTGTCAAC GGATGTCAGA CTTGCTGAAC TTCAGGAGCA GAAAATGTTG
TTGCATGATG AGATAAAAAA CGCAACAGAG TCGCTTGTGG TGATGTTGAA CCTTGATCGG
GGTGTTTCCA TTATACCTAC GGGTGATTTT GTTGTCGATG CTGTGCTGCC TGAGGGAAAT
GAGAAAAACA GGCCTGAGGA GCGGGCCGAT CTAAAAGCGC TCGAAACCTA TCGGCAGGTT
GCAGCCCTGC AGGAAGAGAT GGTTCAGGCT TCAAGGCGTC CACGTTTGAA CGCTTTTCTG
CAGACAAATC TGCACAGTAA CAATATTTTT GGCGGGGGTT CAAGCTGGGC GCTCGGGATG
AACATGCAGT GGAATATTTT CGACGGTATG TCTTCAGTGG GACGTATCCA GGAATCCAAA
GCCCAGGCGC GTGAGGCAAT GTACAATTAT GAAGCTGCAA AGAGCAATAG TCTTGTGGAG
GTGAGCAAAT CGTTCCGGTC GCTGAAAACC GCCAAGGCAA GAATTGCCGT TGCAAGGAAA
TCATTGGAGG AGGCAAGGGT AAGTCTTGAT TATATAAGCA CACAGTTCAA GACTGGTATG
GCGATGACCT TCGAACTCCT GATGAGGGAG CAGGCTTATA CCTATGCTAA AATGAGGTTG
AATCAGGCCA CATATGATTA TTGTGTATCA AGAAGTGAGC TTGAATATTA CCGTGGCAAC
TGA
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| Protein sequence | MKIYKALIGF CMVGALAVPL QANAGETMKL SLSDAIAMAR QNNYTVKAAR SRVDQAEAKI
VQTRQSFLPK VTLSETLVLT NDPGAALVFK LQQNTIEASD FDPAKLNNAD IINDFNTSIQ
VMQPVYNADA AVGRNMAITA KKAQEHMALR SEETIGLQVS KVYYGLILAR KNIEAVEKSI
TTMQAHSNDA AKGYRAGLLP KSDKLSTDVR LAELQEQKML LHDEIKNATE SLVVMLNLDR
GVSIIPTGDF VVDAVLPEGN EKNRPEERAD LKALETYRQV AALQEEMVQA SRRPRLNAFL
QTNLHSNNIF GGGSSWALGM NMQWNIFDGM SSVGRIQESK AQAREAMYNY EAAKSNSLVE
VSKSFRSLKT AKARIAVARK SLEEARVSLD YISTQFKTGM AMTFELLMRE QAYTYAKMRL
NQATYDYCVS RSELEYYRGN
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