| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2717 |
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| Symbol | |
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| ID | 6462624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2808894 |
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| End bp | 2810597 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728877 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_002019492 |
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| Protein GI | 194337698 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TTGATATTGT CATTGTTGGT GGTGGGGGTG CCGGACTTTA TGCCGCCATG
GAGGCAATGA AAACGAATCC GGCACTCAAT ATTGCCGTTC TTACCAAAGT CTATCCCAAT
CGGTCGCATA CCTCTGCGGC TCAGGGTGGC GCTAATGCTG CGCTTGCCAA CAAGGCAAAG
AATGATACGG TTGAGATGCA TATTTTCGAC ACCATCAAGG GCAGCGATTA TCTTGCCGAT
CAGGATGCGG TTGATGTGCT TTGTTCTGAA GCGCCTAAAA TTATTCGTGA GCTTGAAAAT
ATGGGGACGC CGTGGTCAAG AATGGATGAC AAGACCATAG CACAGCGGCC ATTCGGCGGA
GCAACTCTTC CAAGGTGTTG TTACTGTTCC GACAAAACAG GTCACACGAT TCTGCAGACA
CTCTACGAAC AGTGTTTGAA AAAAGGGGTG ATTTTTTTCA ATGAGTATTT TGCGCTGAGC
CTTTCGGTTA ACGGGAGTCG TTCGAGAGGG CTTATTGCCA TGAATATGAA GAGTGGCAAA
GTTGAGGCTT TTCCGGCAAG GACGGTAATT TTTGCTACTG GCGGATATGC CAAAATGTAC
TGGAATCGCT CAAGTAATGC TGCAGGCAAT ACCGGCGATG GCCAGGCCAT TGCTTTCCGC
TCAGGTATTC CTCTCAAAGA TATGGAGTTT GTCCAGTTTC ATCCCACCGG ACTGAGAAAG
AGTGGCTTGC TCATCACTGA AGGGGCGAGG GGTGAAGGTG GCTACCTTGT CAACAAGGAT
GGAGAGCGTT TCATGGCCAG ATATGCGAAA GAGAAGATGG AACTTGGCCC GCGGGATCTT
GTGTCGCGCT CAATTGAAAC CGAGATCAAT GAAGGGAGGG GATTTGACAG CCCTGCAGGA
ACCTATATCC ATCTTGACCT TACCCATTTG GGGGCTGACC TTATCAAGTC GCGGTTGCCC
CAGATACGAG AGATGTCCAT GCAATTTGAA GGCGTTGACC CCATAGAGGA GCCAATTCCG
ATCAGACCGA CCGCTCATTA TTCGATGGGA GGAATCGACA CTGATAATTT TGGCCGAACA
GTTATGCAGG GCGTTTATGC GGCTGGCGAG TGTGGTTGCG TATCGGTTCA TGGTGCAAAT
CGTCTTGGAG GAAATTCTCT GCTTGATATT CTTGTGTTCG GTCGTATTGC TGGCCATACA
GCGGCTGAAG AGGCTGGCAA ATTTGATCCG GGAACGATAC CGGAAGTCGA ACTCAAGGAG
CAGTATGAAG AGATCCGGGG AGGCATGCAT GCATCCGGTC ACTATGAACG GTATGGCGCT
TTGCGGGAAG ATCTTGGTCA TACATTGGCG AGTAACGTTG GTATTTTCAG GGAATCCTCT
CTGATACAGA AGGGTATCCA GGATATTGCG GAGCTTAAAG AACGCTTTAA AAAAGTCCGT
ATCTTTGACA CCAGTGATGT TTTCAACACC AATCTCATGC AGGTGCTTGA ACTGAAAAAT
ATGCTCGATC TGGCCGAAAC CGTTGCAGTC GGCGCTTATG CCCGCCAGGA AAGCCGGGGC
TCTCATACCC GGATTGATTT TCCTGTTCGC GATGACGAGA ACTGGCACAA GCATACATTG
GCAACCCTGG TCGATGGCAA AGTGGTCCTT GGTGAAAAGC CGGTGACTAT GGGACGTTAT
GAACTTAAGG AAAGAACTTA TTAA
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| Protein sequence | MKPFDIVIVG GGGAGLYAAM EAMKTNPALN IAVLTKVYPN RSHTSAAQGG ANAALANKAK
NDTVEMHIFD TIKGSDYLAD QDAVDVLCSE APKIIRELEN MGTPWSRMDD KTIAQRPFGG
ATLPRCCYCS DKTGHTILQT LYEQCLKKGV IFFNEYFALS LSVNGSRSRG LIAMNMKSGK
VEAFPARTVI FATGGYAKMY WNRSSNAAGN TGDGQAIAFR SGIPLKDMEF VQFHPTGLRK
SGLLITEGAR GEGGYLVNKD GERFMARYAK EKMELGPRDL VSRSIETEIN EGRGFDSPAG
TYIHLDLTHL GADLIKSRLP QIREMSMQFE GVDPIEEPIP IRPTAHYSMG GIDTDNFGRT
VMQGVYAAGE CGCVSVHGAN RLGGNSLLDI LVFGRIAGHT AAEEAGKFDP GTIPEVELKE
QYEEIRGGMH ASGHYERYGA LREDLGHTLA SNVGIFRESS LIQKGIQDIA ELKERFKKVR
IFDTSDVFNT NLMQVLELKN MLDLAETVAV GAYARQESRG SHTRIDFPVR DDENWHKHTL
ATLVDGKVVL GEKPVTMGRY ELKERTY
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