| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2700 |
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| Symbol | |
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| ID | 6462566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2790167 |
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| End bp | 2791072 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642728859 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_002019475 |
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| Protein GI | 194337681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00240651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTG TCAGGATTCT TTCAGCCATT CTGTTGCTGC TCCTTGTTGC CGATATAGCG
CGTTATTTTG TTGTTCCCGA TGTTGGACGG CTGGTAGATG AGAATCCAGC AAAAACAGCT
TTTATGGAGA GCCGTGAAGC CGAGTGGCGG CGCGACGGGC TCATCGATAA AAAAATAGAT
CAGAAATGGG TGTCGCTTGA TCATGTTTCC CAGAATCTTG TCAAGGCAGT TCTGATTGCT
GAGGATGACA AGTTCTGGCA GCATGAGGGG TTTGATTATC AGGCGATTGA GAGAGCGATA
GAAAAAAATA TTCTCGCAAA GAAATTCAAG ATGGGTGGCA GCACAATCAG CCAGCAGCTT
GCCAAAAACC TCTACCTCTC TCCGTCAAAA AATCCGATAC GCAAAATCAA GGAGGCCATC
CTTACCTGGC GACTTGAAAA AACGCTCTCC AAACGTCGTA TACTTGAACT TTATGTCAAT
GTTGCAGAAT GGGGAGATGG TATTTTCGGT ATCGGCCAGG CAGCCCGCCA CTATTATGGT
GTCAGTGCGG CCAGGTTAAC AGCACGACAG GCGTCAAGAC TTGCAGCAAT ACTGCCGAAC
CCTATTCTTT ATTCTCCCAA AGGTTCATCA CGCTATGTTC GTAACCGTTC AAGCATCATC
TATGCCATCA TGCGCAAGAG GGGAGTTGTT GTGCCTGACT ACAGGGAGGT TATGGCCTTA
ACGCCTGATA CCACAGCAGT TGTTGATTCG GTTGTGATCG GTATTCCGGA GAATCTGATG
GATCAGTCGC TTTCATCAGA CAGTACCACC GGGAAGGTTT CTGAAGGGGA TGGAGTTCAG
CCAGCGGAGA AAGGAGAAAG TACGACAGAA GTGCCTGCAG AAAGCGGAAA CAACAGCACG
CCCTGA
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| Protein sequence | MKLVRILSAI LLLLLVADIA RYFVVPDVGR LVDENPAKTA FMESREAEWR RDGLIDKKID
QKWVSLDHVS QNLVKAVLIA EDDKFWQHEG FDYQAIERAI EKNILAKKFK MGGSTISQQL
AKNLYLSPSK NPIRKIKEAI LTWRLEKTLS KRRILELYVN VAEWGDGIFG IGQAARHYYG
VSAARLTARQ ASRLAAILPN PILYSPKGSS RYVRNRSSII YAIMRKRGVV VPDYREVMAL
TPDTTAVVDS VVIGIPENLM DQSLSSDSTT GKVSEGDGVQ PAEKGESTTE VPAESGNNST
P
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