Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2686 |
Symbol | |
ID | 6462442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2775057 |
End bp | 2775833 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728846 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002019462 |
Protein GI | 194337668 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00673203 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCATG CCTTGATAAC AGGAGCATCC ATGGGTATTG GTGCAGCCTT TGCCCGGGAG TATGCCCGTC AAGGTCATAA TCTTGTACTG GTTGCCCGCT CGCATGCTCT CTTGCAGACT CTGGCAGAGG AGCTTCGGCG GGAAAGTGGG GTTGCAGTGA CGGTTTGTGT TGAAGATCTG AGTGATGCCG AAAGCCCGGC CCGGATTTAT GCATGCTGTC GGAGGCAGCA TATCGGGGTT GATCTTCTTG TTAATTGCGC AGGGTTATCG TATGCTGGCG ATTTTCAGGA GATTCCGTTT GGAAAGCTCG AAGAGATGAT GATGGTCAAT ATGATGGCAA TGGCCCGTCT TACGCGTCTT TTTTTGCCGG ATATGGTCAC AAAAAGAGTC GGGAGCATTA TTAATGTCGC CTCTCTTGGT GCTCTTCAGG GAGTTCCTGG CCTTGGTCTC TATTCGGCCA CAAAAGCATT TGTTTTAACG CTCAGCGAAG CGCTTCACGG AGAGCTGAAA GGAACGGGGG TAAAAGTGGT TGCGGTCTGT CCCGGTTTCA TCAACACAGA CTTTTTTGAA CATGCAGGTC ATAACAGAGC AAACCTCCGT CTTCCGGTGT ATGGGACTGG CGTGGTTGTT AAAGCAGCAA TCAAAGGTCT GAAAAAAAAC AGGGTACGGG TATTTCCCAC CCTGATTGAT ACGGTTCTGG TCTTTTCACA AAGAGCGGTT TCGAGGAAAA TTGTTATACG CATTGCCGGT TTTATTGCAG CAGTAAAGGA TTGTTGA
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Protein sequence | MQHALITGAS MGIGAAFARE YARQGHNLVL VARSHALLQT LAEELRRESG VAVTVCVEDL SDAESPARIY ACCRRQHIGV DLLVNCAGLS YAGDFQEIPF GKLEEMMMVN MMAMARLTRL FLPDMVTKRV GSIINVASLG ALQGVPGLGL YSATKAFVLT LSEALHGELK GTGVKVVAVC PGFINTDFFE HAGHNRANLR LPVYGTGVVV KAAIKGLKKN RVRVFPTLID TVLVFSQRAV SRKIVIRIAG FIAAVKDC
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