| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2668 |
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| Symbol | alaS |
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| ID | 6461972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2752427 |
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| End bp | 2755093 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728824 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002019444 |
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| Protein GI | 194337650 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCT GGGAAATCAG ACAATCTTTT TTGGATTATT TCGCTCAAAA AGCTCACACC
ATCGTTCGTT CAGCTCCGGT TATTCCTGCC GATGATCCCA CCCTTCTCTT CACCAATGCC
GGAATGAACC AGTTCAAGGA TGTTTTTTTG GGAAAAGGAT CAAGGCCCTA TGTACGGGCA
GCCGATACCC AGAAATGCAT CAGGGCATCA GGCAAGCATA ACGACCTCGA AGATGTTGGC
AGGGATACCT ACCACCACAC CTTTTTTGAA ATGCTCGGTA ACTGGTCATT TGGAGATTAC
TACAAACAAG AGGCCATAAC CTGGGCATGG GAACTGCTGA CCGATGTATG GAAGCTGCCG
AAAGAGCGTC TCTACGCAAC CGTCTATCAG GATGATGATG AAAGCTTTCA GATATGGAAA
ACAGCAACAG ATATAAATCC TGATCACATT ATCCGTTTCG GTGAAAAAGA CAATTTCTGG
GAGATGGGTG AAACCGGCCC CTGTGGCCCC TGTTCCGAGA TTCATATCGA TCTGACCGAA
GATGGTTCCG GCCACAGCCT TGTCAATGTC GGCGATTACC GGGTCATCGA ACTCTGGAAT
CTTGTCTTTA TCCAATATAA CAGGCAGAGT GACGGCTCCC TTGAACCGCT TCCCATGAAA
CATGTCGATA CCGGCATGGG CTTCGAGCGC GTTGCCGCCG TATTGCAGGG AAAAGGGTCA
AACTACGACT CCGACGTTTT TCAGCCACTC TTCGACCGCA TCACCGAAAT TACCGGTGTC
CGCTACGGCG CATCCATGGA CGATCCCCTC GACATAGCCA TGAGGGTTAT AGCCGACCAT
GCCCGTACCC TCACCTTTGC CCTTTCCGAC GGAGCCATGC CCTCCAACGA AGGTCGCGGC
TACGTGCTTC GCCGCATACT CCGCCGGGCA CTCCGCTACT CCAAAAATCT CGGCTATAAC
GAACCCATTC TGCATCAGCT TGTCGGTACA TTAGCTGCCT CAATGGGAGA TGTCTTTCCC
GAGCTGCGCA AACAGCAGGA GACTGTCAGT AAAATCATCA GGGCCGAAGA GGAAAGTTTC
ATCGTTACCC TCGACCGGGG TATAGAGATA TTCAACGAAG TTATTGAGCA AGTCCGCTCA
GCCAACAGCA CAACCATTAC CGGTGAAGAT GCCTTCAAAC TCTACGACAC CTATGGCTTC
CCCTTCGATT TGACCCGCCT GATGGCCTCC GATGTTGGCT TTTCTGTTGA CGGTGAAGGT
TTTGAACACT GCATGCAGCA GCAGAAAACC CGAGCAAGAA CCGACCGCAA GGAAAAACAT
CAGGTACAGG ATGACGGATC GCAATGGCTC TGGTTCAGCG ACGTGCATCG CTCGGAGTTT
GCAGGCTACG ACCAGCTTGA GATGCCCGTG CTTATTACCG GCATCAAGCA TCTCCAGGGA
AAGCTGCTTC TGGTACTCGA CCGTACCCCC TTCTATGCTG AAAGTGGCGG CCAGGTTGGA
GACCGGGGCT GGATAGAGAG CGCCACCTAT CGTCTTCAGG TATCCGATAC CATCAAGGAT
GGCGATGCCA TTGTTCATCT TGTTACCGAA GCCTTCGACA AGATTTTGGA TACGCCAATC
AGTGTTGATG ATCTCCAGCT CGATGAGAAG GAGCTTTCTG CTGAAGCCTC AGTAGACCGT
CATTTGCGCC AGGATACCGA GTGCAACCAT ACCGCTACAC ACCTCATGCA CAGTGCGCTC
CGCAGGATTC TGGGGCAGCA TGTCCAGCAG AAGGGCTCAT ATGTCAATGC CGAACGCCTT
CGTTTCGATT TCAGCCATTT TTCCCGCATG ACCGAAGCAG AGATTGAGGC CGTTGAAGCC
GACGTGAACG ACCATATCCG CCGAGCAGAA CCCGTGCAGA AACATGCCGA TGTTCTCTAC
GATGACGCCA TTGCCATGGG AGCGCTTGCC TTTTTTGGCG ACAAATATGC CGACCGGGTA
CGGGTTATTG AAATTCCGGG AATCTCCGTC GAACTCTGTG GCGGCACCCA TGCAGACAAT
ATCGGACGTA TCGGGCTCTT CAAGATAGTC AGTGAATCAT CGGTAGCATC AGGCGTTCGA
CGTATAGAAG CGCTCACCGG AAAAGCGGCA GAAAAACTCT TGTGGAAAGA GTACCATGAA
CTTCAGCAAG TGCGTCATCT CCTTAAAGCA AAAGGGGATG AACCCGTACT CGAAAAAATT
GTCGCCCTGA TGGATGCAAA AAAAGAGCTG GAAAAAGAGC TGAGCGGCAG CAGGGTAGGC
TCGCTTGTCA CCAGCTTGAC TGCCGAGCTT GACGCATCTC CCGATATCAG TGGCTGCCGG
GTCATGACCA AAGTGCTCGA AGAGGTAGAC GGCGACACCC TTCGTCAGGC AGCGCTTGCC
CTCCGCGATC AGGCCACCTC AGTTGCAGGG CTGCTTTGCA GTGTGGAAGA TGGAAAAATA
GCGCTGGTCA GTTTTGCTTC CGACAAAGCT GTCCGGGAGT TTGGTATTGA TGCCGGCAAA
CTGATCCGCG AGGCTGCACA ATGCGTGCAT GGCGGCGGCG GTGGCAAACC CGAGTTCGCA
ACAGCCGGAG GTAAAAATCC GGAAGGTATA CAGAAGGCAT TTGACACCTT TCTTGCCGCA
ATCCGGGAAA AAACGGGCAC GATATAA
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| Protein sequence | MKSWEIRQSF LDYFAQKAHT IVRSAPVIPA DDPTLLFTNA GMNQFKDVFL GKGSRPYVRA
ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKQEAITWAW ELLTDVWKLP
KERLYATVYQ DDDESFQIWK TATDINPDHI IRFGEKDNFW EMGETGPCGP CSEIHIDLTE
DGSGHSLVNV GDYRVIELWN LVFIQYNRQS DGSLEPLPMK HVDTGMGFER VAAVLQGKGS
NYDSDVFQPL FDRITEITGV RYGASMDDPL DIAMRVIADH ARTLTFALSD GAMPSNEGRG
YVLRRILRRA LRYSKNLGYN EPILHQLVGT LAASMGDVFP ELRKQQETVS KIIRAEEESF
IVTLDRGIEI FNEVIEQVRS ANSTTITGED AFKLYDTYGF PFDLTRLMAS DVGFSVDGEG
FEHCMQQQKT RARTDRKEKH QVQDDGSQWL WFSDVHRSEF AGYDQLEMPV LITGIKHLQG
KLLLVLDRTP FYAESGGQVG DRGWIESATY RLQVSDTIKD GDAIVHLVTE AFDKILDTPI
SVDDLQLDEK ELSAEASVDR HLRQDTECNH TATHLMHSAL RRILGQHVQQ KGSYVNAERL
RFDFSHFSRM TEAEIEAVEA DVNDHIRRAE PVQKHADVLY DDAIAMGALA FFGDKYADRV
RVIEIPGISV ELCGGTHADN IGRIGLFKIV SESSVASGVR RIEALTGKAA EKLLWKEYHE
LQQVRHLLKA KGDEPVLEKI VALMDAKKEL EKELSGSRVG SLVTSLTAEL DASPDISGCR
VMTKVLEEVD GDTLRQAALA LRDQATSVAG LLCSVEDGKI ALVSFASDKA VREFGIDAGK
LIREAAQCVH GGGGGKPEFA TAGGKNPEGI QKAFDTFLAA IREKTGTI
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