| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2643 |
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| Symbol | |
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| ID | 6461866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2732438 |
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| End bp | 2734705 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728800 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_002019420 |
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| Protein GI | 194337626 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAAC TATTGAACAA GACCTTTTTT TTTCTTTTTA TATCGTTCGT TACCATAACG
CTGATATCCC CGGAGATCTC TGCAAAAGGC TCTTTTCTGG GTCTGCCAAG CCTTGAGGAA
CTTGAAAATC CCAACCCGGA ACTGGCCTCT CTTGTCTATT CCGAGGATGG TGTGCTGCTC
CATAAATTTT TTGTAAAAAA CCGAACCTTC GTTCCGCTGA GATCAATTCC ATTGTCTACC
CGTTATGCCC TGATTGCAAC CGAAGATGTC GCTTTTTACA ACCACTGGGG AGTCGATCTG
AGACGGTTTG TTTTGGCAAT GGGTGAAAAT ATCATCAAGG GGCGAACCCG CTGGCAGGGG
GCAAGCACCA TTACCCAGCA GCTTGCCAAA AATCTCTACC TAACCAGGGA GAGAACCATA
AGCCGAAAAT TCAAGGAGTT GATTACCGCA ATTGAACTCG AAAAGACCTA TACAAAAGAC
GAGATTCTTG CACTCTATCT CAACACCGTC TATTTCGGTG CCGGGGCGTA CGGCATTGAG
GCCGCAGCCC ATACTTATTT TGGAAAACCC GCTTCTCTCC TTACGCTGCC GGAGAGTGCA
ACGCTGATAG CAACACTGAA GAACCCGACA GCCTATAACC CTGCAAAGTA TCCGTCAAGC
GCAGCCAGCC GGCGAAACCT GATCCTCTCT TTGATGGAAA AGGTTAAATT CATTACGCCC
CAACAGGCAG CCAAAGCACA AAGAACCCCA TTGGTGGTAA GATATACTCC GATAGACCAC
CAGGGTAGAG CTCCCTATTT TACCGAGTAT ATCCGCCAGA CGCTGAAACC ATCGCCGACA
GTCGGAAACA TTGACCTTTT CCGTGACGGA ATGACGATAC GAACAACACT CGACAGCCGC
ATGCAAAACT ATGCCCAGCA GGCCTCCGCC GAACATCTGG CTGAACTGCA GGCTACATTT
GACCGCTCAT GGGTATGGCC GGAATCGCTG AAGAACCAGA TGATCATGGA GAGCGAACGG
TTCAAGGGAT TGAAAGAGAA TGGTCTCTCG AATCAGCAGG CGATGGCAAA GATCAAAGCA
GACAAGGTTT GGGTGAAGGA GCTGCTGAGG GATAAAACCA GAATACAGGT GGCATTGGTG
GCCATTGATC CGAGCAACGG TCATGTCAAG GCGTGGGTTG GAGGAAACAG GTTCTCACCC
GATGAATACA GGTATCAATA CGACCATGTC TGGCAGGCCA AGCGACAACC CGGCTCAACA
TTCAAGCCTT TTGTCTATGC CGCAGCCATC GATAAAGGAT TGCCTGCAAA CTTTCAGGTC
CTCGACCAAC CCCTCACGTT TACTTCAGGA AACGGCGTTT GGTCGCCGAG AAATTCCGAC
GGTTCGTCAG GCGGCATGAC GACGTTGCGT TCGGCATTGA TCCACTCATT AAACCAGGTT
ACGGTCAGGC TTGCCTATGA ACAACTGTCG GTAGCGGAAA TCATCAGCTA TGCGAAAAGA
ATGGGTATCA CCTCCCCCCT TGCTTCAAAT CTCTCGCTCG TTCTTGGAAC GTCGGCAGTG
TCACCACTGG AACTGGCTGG AGCCTTTTCA ACCTTTGCGA ATAACGGGAT CTGGCATGAA
CCGGTCTCAA TCCTGAAACT TGAAGACAAG CACAACCGTC CCATTTCGGA ATACATTCCA
AACCACCGTA TTGCCATCGA CTCCACCTCC AATTTTGTGA TGGTCTCGAT GCTCAGGGAT
GTGATCAACA GGGGTACAGG CGCTGCAGTC CGATCCCGTT ATGGCTTTAA CATTGAGGCG
GCGGGCAAAA CCGGCACAAC CCAGAGTATG AGAGATGCCT GGTTTGCGGG TTTCACACCA
CAACTTGTAG CTGTTGTATG GACTGGATTT GATGATGAGC GCATCAAGTT TACCTCCATG
GAATATGGTC AGGGCGCTCG GGCAGCGCTT CCCATATGGG CCGGCTTTAT GAAACGCTGT
TACAGTGATC CCTCTCTGCA ACTCGATAAT CGCTCTTTTC ATATACCCGA GACCATTATT
GCCGTACCGA TTTCCCCGCA GACCAATACA CCTTCTGATC TGCTCGGCAG TAATGTCTAT
ATGGAGTATT ATACGCCAAA GGGCTTCCAG TACTATCAGT CCCATCCTGT ACAACCAAAC
AATGGAAGCT CCCCTTCTGC AGAGGGAGAG AACTCTGATT CCGGAAACCA CGACGGATCA
CCTCATCTGC AGATGCCTTT TCCAGCAAAA GAAGAGAGTG TTTTCTGA
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| Protein sequence | MSKLLNKTFF FLFISFVTIT LISPEISAKG SFLGLPSLEE LENPNPELAS LVYSEDGVLL
HKFFVKNRTF VPLRSIPLST RYALIATEDV AFYNHWGVDL RRFVLAMGEN IIKGRTRWQG
ASTITQQLAK NLYLTRERTI SRKFKELITA IELEKTYTKD EILALYLNTV YFGAGAYGIE
AAAHTYFGKP ASLLTLPESA TLIATLKNPT AYNPAKYPSS AASRRNLILS LMEKVKFITP
QQAAKAQRTP LVVRYTPIDH QGRAPYFTEY IRQTLKPSPT VGNIDLFRDG MTIRTTLDSR
MQNYAQQASA EHLAELQATF DRSWVWPESL KNQMIMESER FKGLKENGLS NQQAMAKIKA
DKVWVKELLR DKTRIQVALV AIDPSNGHVK AWVGGNRFSP DEYRYQYDHV WQAKRQPGST
FKPFVYAAAI DKGLPANFQV LDQPLTFTSG NGVWSPRNSD GSSGGMTTLR SALIHSLNQV
TVRLAYEQLS VAEIISYAKR MGITSPLASN LSLVLGTSAV SPLELAGAFS TFANNGIWHE
PVSILKLEDK HNRPISEYIP NHRIAIDSTS NFVMVSMLRD VINRGTGAAV RSRYGFNIEA
AGKTGTTQSM RDAWFAGFTP QLVAVVWTGF DDERIKFTSM EYGQGARAAL PIWAGFMKRC
YSDPSLQLDN RSFHIPETII AVPISPQTNT PSDLLGSNVY MEYYTPKGFQ YYQSHPVQPN
NGSSPSAEGE NSDSGNHDGS PHLQMPFPAK EESVF
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