| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2584 |
|---|
| Symbol | |
|---|
| ID | 6463690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2658394 |
|---|
| End bp | 2659092 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642728741 |
|---|
| Product | Mg-protoporphyrin IX methyl transferase |
|---|
| Protein accession | YP_002019363 |
|---|
| Protein GI | 194337569 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR02021] magnesium protoporphyrin O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCT CATCTTTCAA TGCTGAAGAA CACAAGAAAA TGCTCCGTTC CTATTTCAAT
GGCCAGGGCT TTCAGCGATG GGCATCGATC TACGGCGACG ACAAACTCTC CTCCGTACGC
AACACCGTGC GTCAGGGCCA TGCCGTCATG ATGGACAAGG CATTCGACTG GCTGCAGCAG
CTCGGACTAC CCAAAGGAGC CTCGATACTT GATGCCGGAT GCGGCACAGG GCTCTTCAGC
ATCCGCCTCG CAAAAGCGGG GTACAAGGTA ACGTCGGTCG ATATTGCCTC GCAGATGGTC
AACAAGGCAA AAGAGGAGGC CACCAGGCAA GGGGTAGAGA AAAACATCAC CTTTGAGGTC
AACACCCTTG AATCAGTAAG CGGCACCTAC GATGCCGTCG TCTGCTTTGA CGTCCTGATC
CACTACCCGG CAGAGGGATT TTCACAGGCA TTCCGCAACC TCGCCAGCCT GACAAAAGGA
TCGGTTATTT TCACCTATGC CCCCTACAAC AAAATCCTTG CACTGCAGCA CTGGATTGGC
GGCTATTTCC CGAAAAAAGA GCGCCGCACC ACCATTCAGA TGATCCGCGA CGAAGAGATG
CAAAACGCCA TGAAAAAAAC AGGCATGAAG GTAAAAACCC GAGAAAAGAT CAGCTTCGGA
TTTTATCATA CCATGCTGAT GAACGCGTCA CACAACTGA
|
|---|
| Protein sequence | MSSSSFNAEE HKKMLRSYFN GQGFQRWASI YGDDKLSSVR NTVRQGHAVM MDKAFDWLQQ
LGLPKGASIL DAGCGTGLFS IRLAKAGYKV TSVDIASQMV NKAKEEATRQ GVEKNITFEV
NTLESVSGTY DAVVCFDVLI HYPAEGFSQA FRNLASLTKG SVIFTYAPYN KILALQHWIG
GYFPKKERRT TIQMIRDEEM QNAMKKTGMK VKTREKISFG FYHTMLMNAS HN
|
|---|
| |