Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2546 |
Symbol | |
ID | 6463730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2614371 |
End bp | 2615105 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728703 |
Product | ABC transporter related |
Protein accession | YP_002019325 |
Protein GI | 194337531 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.651086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA CACTGAGCTG TAACAAGCTA AAGAAGATCT ACAATAAACG CGAAGTTGTC AAAAGCTCAT CTATTGAGGT AAAACAGGGA GAAATAGTTG GGCTTCTTGG ACCAAACGGT GCAGGAAAAA CCACGACCTT TTACATGATT GTGGGGCTGG TTCGGCCTGA TGGTGGTGAT GTCTTTCTCG ATTCAGCAAA CATCACCCAA CTGCCTATGT ACAAACGGGC ACGTCTTGGT ATCGGCTACC TCCCCCAGGA AGCATCGGTC TTCCGAAACA TGACGGTCGA ACAAAACATC TTGAGCGTGC TTGAATTCAC CTCCCTCTCC AAAGCAGAAC GCAAGGAGAG AACCAGCATC ATGCTTGAGG AGCTGAACAT TACGGCTATC CGTAAAAGCA TGGGTTATGC GCTCTCCGGT GGCGAACGCC GACGCACGGA AATAGCAAGG GCCCTTGCGC TCAATCCCAA ATTCATTCTG CTCGACGAAC CCTTCGCCGG AGTTGACCCG ATTGCTGTTG AAGATATCCA GCAAATTGTT GAAGGGCTTG CCAAACGCGA CATCGGTGTA CTTATCACCG ACCATAACGT CCACGAAACC CTCTCCATTA CTCATCACGC CTACCTCCTC TTTGACGGAA GCATCTTCAT GCACGGCACC CCTGAAGAGA TCGCTTCCAA TCCAGAGGTC AGAAAAATGT ACCTCGGAGA AAAATTCACC CTCGAACGGT ATTAA
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Protein sequence | MKATLSCNKL KKIYNKREVV KSSSIEVKQG EIVGLLGPNG AGKTTTFYMI VGLVRPDGGD VFLDSANITQ LPMYKRARLG IGYLPQEASV FRNMTVEQNI LSVLEFTSLS KAERKERTSI MLEELNITAI RKSMGYALSG GERRRTEIAR ALALNPKFIL LDEPFAGVDP IAVEDIQQIV EGLAKRDIGV LITDHNVHET LSITHHAYLL FDGSIFMHGT PEEIASNPEV RKMYLGEKFT LERY
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