| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2470 |
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| Symbol | |
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| ID | 6462223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2559031 |
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| End bp | 2560680 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728649 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_002019271 |
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| Protein GI | 194337477 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.238543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGTA TTCTTCTTTT CTGCCTTGCC TTTAGTCCGC TACCACCTGT ACCGGTCAAA
CCTGCTCCTG TGCCGCAGGA ACAGCTACAG CCGCAGAAAG AGTTTCAGCC TGCCGTAGCC
GAGAAGATAC GAGGTCGTTT TCTCCATCAA CTTCGCCAGA CCACTCAACC AGACCCTGTT
GAACGGCTCT ATGCTGCAAG GGGGTTTCAG CCTGTATGGA CAAATAAGGC AATGATTGAT
GAGCTGATTA CGGCAATTGG GGAGGCTGCC AATGATGGTC TTGATCCGGC AGACTACCGA
ATCAGGGAGA TCAGGGCCCT ATCCGGCAAG TCAGAAGTGA CCTCTGATCA GGCAGCCTGT
TACGATGTTC TGATGACCAA CTCCCTTCTC TCTCTTGCAG TTCATCTCCG CTATGGGAGG
GTTGATCCCG AAACTCTTGA TACCCACTGG AACAGTCGTC AAACGAGGAA CGGGAGTATT
GTTGAGAACA AGCTCCATCA CGCCATTGCC TCTGGCCATA TCGCTGACGC TTTGAAAGAA
CTTCGATTAC AGCATCCCAA ATATGAGCAG CTTCGAAAAG GGCTTGTACG CTATCGCACC
ATTGCGCGTG CCGGCGGCTG GCCAGTTTTG GCGGAGGGTC CGAAGCTGCA AGAGGGAGCA
AGGGGGAAGC GGGTCATGCT GTTGCGTCAG CGACTCCGGG TATCGGGTGA TATTGCTGTT
CTGAATACGG ATACTTCAAC TGTTTACAAC AGAGAGGTGG TCGAAGCCGT CAAGCACTTT
CAGAAGCGGA ACGGTATGGT CGCCGATGGC GTGGTTGGAG CAACTACCCT CCGTGTCATG
AATATACCGG TGGAGCGCCG AATTGATGAG ATTCGTCTCA ATCTCGAACG GTATCGATGG
TTTTTGCGTG ATCTTGAACC GACAGCCATT ATGGTGAACA TTCCGCGCTT TACCCTGCAG
TATATCGAAA ATGGTCAAGA CAAGTGGGAA ACACGCGTTA TTACGGGAAA ACCTCCGCGT
GAAACTCCGC TCTTCAAGGC GGATATGCAA TATGTTATCC TGAATCCCAG GTGGGTCATT
CCGCCAACCA TTCTTGCAAA GGATGCGTTA CCCGCTTTGC GTAAAAGCAA TTCATATCTG
AACCGTAAAA GGTTGACCAT TATTGATCGG AACGGAGCGG TCATTGATCC TGTATCGGTT
AACTGGTCGC AATACTCGGG AGGGAACTTT CCCTATCGCC TCCAGCAGAG TTCCGGAGAT
CACGGCGCAT TGGGCAGAAT CAAGTTCCTG CTTCCCAATC GCTACATTGT CTATCTGCAC
GATACGCCAA ACAAAGAGCT TTTTGCAGCG AGTAAAAGAC TCTTCAGTTC AGGGTGTGTC
AGAGTAGAAA ATCCTGTTGA CCTTGCAACC CTGGTCTTGC AGGACAGCGT CCGATGGAGC
AAAGTAAAGA TACTTTCCGC AATCAAGAGT GGAAAAACAA AAACTGTACT CCTTCCCAAA
CGGATTCCGG TCTATCTCCT TTACCTGACA GTTACGCCTG AGGGTGATGA GCTCTTTTTC
CGTGACGATG TTTACAACCG TGACGAACGA TTACTGAAAG CACTGAACAA ACCTCTTCCT
CAATACAAAA CGGAAAGCTG CGGCTTGTAA
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| Protein sequence | MIGILLFCLA FSPLPPVPVK PAPVPQEQLQ PQKEFQPAVA EKIRGRFLHQ LRQTTQPDPV
ERLYAARGFQ PVWTNKAMID ELITAIGEAA NDGLDPADYR IREIRALSGK SEVTSDQAAC
YDVLMTNSLL SLAVHLRYGR VDPETLDTHW NSRQTRNGSI VENKLHHAIA SGHIADALKE
LRLQHPKYEQ LRKGLVRYRT IARAGGWPVL AEGPKLQEGA RGKRVMLLRQ RLRVSGDIAV
LNTDTSTVYN REVVEAVKHF QKRNGMVADG VVGATTLRVM NIPVERRIDE IRLNLERYRW
FLRDLEPTAI MVNIPRFTLQ YIENGQDKWE TRVITGKPPR ETPLFKADMQ YVILNPRWVI
PPTILAKDAL PALRKSNSYL NRKRLTIIDR NGAVIDPVSV NWSQYSGGNF PYRLQQSSGD
HGALGRIKFL LPNRYIVYLH DTPNKELFAA SKRLFSSGCV RVENPVDLAT LVLQDSVRWS
KVKILSAIKS GKTKTVLLPK RIPVYLLYLT VTPEGDELFF RDDVYNRDER LLKALNKPLP
QYKTESCGL
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