Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2461 |
Symbol | mnmA |
ID | 6462430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2549170 |
End bp | 2550255 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642728640 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_002019262 |
Protein GI | 194337468 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAC AGAAAAAAGT GGTTGTCGGG ATCTCGGGTG GGGTTGATTC TGCCGTTTCG GCATGTCTGC TGGTCGAGCA GGGCTATGCG GTGACGGGGT TGAACATTCG GGTGCTTGAC GCGCCTGATG AGAGCCCTTC GCTGAGGCCT TCGCCGCTGG TGATCAGTGA CCATCCTGAT TTTCAGATTC CGGTGTTGAG CCTGAACCTG AGCCGGAAGT TCCGCGATGA GGTTATTGGT TATTTTCATG AGGATTATCT TGGCGGGAGG ACGCCCAACC CCTGCATGGT CTGCAACAAG AAGATCAAGT GGTTTGGCCT CTTTGAGGGG CTGCGGCTGC TTGATGCTGA TTTTGTTGCG ACGGGCCATT TTGCGGCCAC CTCTTTCAGT GAGGGAAGAT ATCGCCTCTA TAAAGGGGCA GATCCGGAAA AGGATCAGAG TTATTTTCTC TGGATGCTTT CGCAGGGTGA CCTGGCCAGA ACCCTTTTTC CGCTTGGAGA GTTGACCAAA CCGGAGGTGC GTGCGCTGGC CCGCTCTTTT GGGGTTAGGG CGGCTGAAAA GAGGGAGAGT CAGGAGATCT GTTTTGTGCC GCAGGATGAT TATTGCGGCT ACCTTGCCAG CGCTATCCCC GGCCTGGCCG AACGGGTGGC GGATGGCGAT ATTGTGGATG AGTCGGGCCG GGTTATTGGT AAGCACCGGG GATATCCCTT CTATACTATT GGCCAGCGCC GGGGGCTTGG TGTTTCGGCC AAAGAGCCGC TCTATGTGAC GGCGCTCGAC ACGGAGCAGA ACCGGATTGA GGTTGGAAAA AAGTCTTCGC TGGAGTGCAG CTCGCTTGTT GCGTCCGGGA TAAACTTGAT CGGTATGGAG AGGCCCAACA TCCCGATTGA GGCTTATGGA AAAATCCGTT ATCGTGACCG GGAGACTCCC TGCACGCTTG AGCCGTTCGG TGAAAACTCG GCAACGGTTT CGTTCAGCAC ACCAAAAAGC GCCGTGGCGA AGGGGCAGGC GGCAGTTTTT TACCGCGATC GTGAAGTGCT CGGCGGCGGC TTTATTACGC AGGTCATGCA GGAATCACAT CAGTAA
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Protein sequence | MSVQKKVVVG ISGGVDSAVS ACLLVEQGYA VTGLNIRVLD APDESPSLRP SPLVISDHPD FQIPVLSLNL SRKFRDEVIG YFHEDYLGGR TPNPCMVCNK KIKWFGLFEG LRLLDADFVA TGHFAATSFS EGRYRLYKGA DPEKDQSYFL WMLSQGDLAR TLFPLGELTK PEVRALARSF GVRAAEKRES QEICFVPQDD YCGYLASAIP GLAERVADGD IVDESGRVIG KHRGYPFYTI GQRRGLGVSA KEPLYVTALD TEQNRIEVGK KSSLECSSLV ASGINLIGME RPNIPIEAYG KIRYRDRETP CTLEPFGENS ATVSFSTPKS AVAKGQAAVF YRDREVLGGG FITQVMQESH Q
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