| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2445 |
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| Symbol | |
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| ID | 6461271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2530108 |
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| End bp | 2530986 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728626 |
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| Product | NmrA family protein |
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| Protein accession | YP_002019248 |
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| Protein GI | 194337454 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.385594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGAG TACTTGTGGC CGGTTCGACC GGTTATCTTG GTCGTTATGC AGTGCAGGAG
TTCAAAAATC GTGGCTATTG GGTGCGTGCC CTGGTGCGTA ACCCTGACAA GGTCGCCCAA
CCCGGCCCTT ATTTCGCGCC GGCTATCAAG GATCTGGTTG ACGAGGTTAT CGTGGGTGAT
GCCACGAAAC CGGAAACCAT TGCTGCGGCA TGTGATGGTA TCGATGTTGT TTTTTCGTCG
CTTGGGATGA TCAAGCCTGA TTTTGTCCAT ACTATCTTTG AGGTGGATTA TCAGGCGAAC
ATGAATCTTC TGGATGTGGC GCTGAAGGCG AAGGTGAAGA AGTTTGTCTA TGTCTCGGTT
TTTGATGCGC ATCGGATGAT GAATATTCCG AATGTGCAGG CTCATGAGAA GTTTGTCAGG
GAGTTGAAGG CTGCGAATAT TGAGTCGGCC ATTATTCGTC CGACTGGCTA CTATTCGGAG
ATCGGGCAGT TTGTTGCGCG GGCACGCAAA GGGTTCATGC TGATGGTGGG GGATGGTTAC
CAGCGTTCGA ATCCCATTCA CGGCGCTGAC CTTGCAAAGG TGTGCGTTGA TGCGGTCGAT
GGAACGGCAA AAGAGGTTTC CGTGGGCGGG CCTGAAGTGT TCACCTATCT CGAAATGGTT
GATCTCGCTA TGGAAATTGC CCAGACCAAA CCTATTGTTT TTCCGCTTCC ACTCTGGGCG
GCTGACGGGC TGGTTGCGGC TGTTGGTCTC TTCAATCGCG ATGTGCATGA TGTGGCGCTC
TTTGCAACGA CACTCAGCCG GGTGGACTTT ATCGCTCCGC TCTATGGCAC GCATCGGTTG
CGTGATTTCT TCATGCAGTG TGGGGTGATG GGAAGCTGA
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| Protein sequence | MKRVLVAGST GYLGRYAVQE FKNRGYWVRA LVRNPDKVAQ PGPYFAPAIK DLVDEVIVGD
ATKPETIAAA CDGIDVVFSS LGMIKPDFVH TIFEVDYQAN MNLLDVALKA KVKKFVYVSV
FDAHRMMNIP NVQAHEKFVR ELKAANIESA IIRPTGYYSE IGQFVARARK GFMLMVGDGY
QRSNPIHGAD LAKVCVDAVD GTAKEVSVGG PEVFTYLEMV DLAMEIAQTK PIVFPLPLWA
ADGLVAAVGL FNRDVHDVAL FATTLSRVDF IAPLYGTHRL RDFFMQCGVM GS
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