| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2385 |
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| Symbol | |
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| ID | 6460925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2470530 |
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| End bp | 2473214 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728570 |
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| Product | Patatin |
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| Protein accession | YP_002019193 |
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| Protein GI | 194337399 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCTT CACCGGTTTT GGCTTCGCCA GCCTCCCCTG CCCTTGTCTA TCCCGACACT
TTGAAGCTTC CCGTGCGCCG TTTTGCACTG CATCACGCCA TGAGAGCAGC AAGAAAAAGC
GTCGGGCTTG CCTTGTCAGG AGGCGGCGCC AACGCTCTTT CACAGATAGG GCTCCTCAAA
GCTCTTGATG AAGAGAGGGT TCCTGTTGAT TTTATTGCCG GCACAAGCAT GGGTGCCATT
ATTGGAGCGC TCTACAGTTG CGGATACAGC CCGGATGAAC TTGAAACGCT TGCCCATAGC
CTGAACTGGC AATCCATGGT CACGCTCCAG AAAGATTACA GCCGCTCCAA CATCTTTCTT
GAACAGCAAA AAATCCGTGA CCGCGCCTCA ATCGCTATCC GCTTCGACAA GCTGAAACTT
CTGATGCCCA AGTCGCTTAA TTCCGCTCAG CCGCTCACAA AAACTCTCGA CCTTCTGGTT
TTAAACGCCC TTTATAAAAC GTCAGGGGAT TTCTCTACCC TTCCTGTCAA TTTCAGGGCT
GTTGCGACCG ATCTGGTTTC AGGAAAACGG ATCACCCTCA CCACAGGCTC ACTCTCTGAA
GCAATACGGG CAAGCAGCAC CGTTCCGATT CTCTTTGAAC CGATTCTCCG TGATGGCTAT
CAACTCGTTG ATGGCGGACT CGTTGCAAAT CTTCCGGTCG ATGAACTCAA CACGGTCAAC
GTGCAATACA AAGTTGCCGT CGATACACAC GGAAGCATGT ACGCAACCGG CGGAGAACTT
GATCTGCCCT GGAAGGCGGC CGATCAGACG ATGACCATTC TGACCATGCA GCAATATCCT
GCACAGTTGG CAAAAGCAAA CATCATCATC ACTCCTGACC TCGAGAACCA TAAGGCAACC
GATTTTTCAG ATATCAAGGC TCTTGTTGAT GCCGGTTATA CCAAAGGGAA AATTTCAGCA
AGCATTATCA AACGCAGTAT AGAGAACAAA ACTCCACACG GCACTGCAAT CGGGAAGTAT
GCAAAAAGCC TTCTGTTTGC TGGAGAGGGC CCCGAATTCC GGGAACACTA CCTTCTTGTG
TCATCCATTA TTCACCATGC AACGGATCTC AATCAGAGCC TTCAGGAACT CCTCGAAACG
GATCTCTTCA CCAGCGTCTA TGCCGAACTG GACAGCCGAC GCCAGACAGT TCTCTTCCAC
CTTGCACCGC TTCCGGCAAT ACGGACGGTA ACTGTCAGCG GAGGGCCCGC CGAAGCACTT
GCATCCGAAG AGATCGACAC CTGCTTCAAG CCAATAGTAA ACCGACTCTA CACCAATGAG
GCTGGCACAA GGGCTCTTGA AGCGCTGGTA AAAAAATACC GGGAAAAAGG GTACAGCCTT
GTCACCATCA ACAGCACAGC AATAGAGAGT GGCAAACTCC AGGTAAACGT TTCATCGGGA
AAAGTGGATG GTATCGACAT ACGCCGGGAC AAAAATATCA CCGGCATCAC TCCTGTAGAG
CGCGAAATCA AAATCGATAC CACGCAATCG CTCAGCATCC AAAATGCCGA AGAGTCTGTC
GATAATCTTT ACGACACCGG CTCCTTCAGC AATGTCTCCA TCTCAACAGA ATCACCCGCG
ACATTGCATC CCGACGAGCG TACGCTCCTG AGATTTTCTC TTGAGGAAAA ACCATCGTCA
GTACTTCGGC TCGGGTTGCG CTATGATGAA ACAAACAATG CCCAGTTTCT TCTTGATGTC
AGAAACGAAA ATCTCGCAGG GACAACAAGC TCAATCGGTG GCTGGCTGAA AGCAGGAAGA
AAGAACAACC TCGTCAACAT GGAGTTCAAT ATGCCACGCA TAGGCCCCTC CCATTTGACG
ATCTCCTCAC GCCTTTTTTA TGACCAGCAT CTGTTCGAAC AGTGCAATAC CGCAGGCGAA
ACAATAAATT ACGGAATCCA GAAATATGGC TTCAGTCCGG CTTTCGGTGT GAGAATCCGA
AAAAACGGAC AATTTATAGC CGACATGACC CTGCAAAATG CACAATCCTA TGCTGAAAAA
CATAACGACA CCCTGCTGAA GACAGCAACA ACCAACATGC TCTCTGTGGG AGCACAGTTT
ACCCTTGACT CAAGAGACAA CCCACTGATT CCCTCCACGG GAAGCTATAC CAACATCAGA
TATTCGATGA CTCCGATACT GCTCGACAAT CACGATATAT TCTGGCAGGT ATCGGGTAAC
CACGAAGAAA ATATCCATCT CGGAAAGAAA ACGACACTGC AACTCACGGG CCTTTTCGGA
CTGAGCAGCA GCAACATGCC ACTGTCAGAG AAATTCTTCC TTGGAGGGCC GGGAACAACC
TACAGTCAGC GCTTCATCGG CTTGAAAGAA AACTATCTTC CCTGCAATAA CATGGCTGCT
GCCGGAATGC ATCTGCGCTA CAAGCCCTCA TTCGCCATTC TCTTTCCGGC ATCACTGCTC
CTGCACTACA ATGTCGGGAA TATCTGGGAA GAGCAGAACG ATATCTCCCT GGCGCACCTT
ATTCATGGCT ATGGAAGCAG CATCATATGG GAAACCCCTC TTGGCCCGGC AAGATTTACG
GTTTCAAAAA CGGTTCCATT TCCCGAAAAA GATCCCATTA AAGAAACAGC ATCATTACAA
TTTTCAGATA CCATTTTTTA TTTCAGTATC GGTCACAACT TTTGA
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| Protein sequence | MAPSPVLASP ASPALVYPDT LKLPVRRFAL HHAMRAARKS VGLALSGGGA NALSQIGLLK
ALDEERVPVD FIAGTSMGAI IGALYSCGYS PDELETLAHS LNWQSMVTLQ KDYSRSNIFL
EQQKIRDRAS IAIRFDKLKL LMPKSLNSAQ PLTKTLDLLV LNALYKTSGD FSTLPVNFRA
VATDLVSGKR ITLTTGSLSE AIRASSTVPI LFEPILRDGY QLVDGGLVAN LPVDELNTVN
VQYKVAVDTH GSMYATGGEL DLPWKAADQT MTILTMQQYP AQLAKANIII TPDLENHKAT
DFSDIKALVD AGYTKGKISA SIIKRSIENK TPHGTAIGKY AKSLLFAGEG PEFREHYLLV
SSIIHHATDL NQSLQELLET DLFTSVYAEL DSRRQTVLFH LAPLPAIRTV TVSGGPAEAL
ASEEIDTCFK PIVNRLYTNE AGTRALEALV KKYREKGYSL VTINSTAIES GKLQVNVSSG
KVDGIDIRRD KNITGITPVE REIKIDTTQS LSIQNAEESV DNLYDTGSFS NVSISTESPA
TLHPDERTLL RFSLEEKPSS VLRLGLRYDE TNNAQFLLDV RNENLAGTTS SIGGWLKAGR
KNNLVNMEFN MPRIGPSHLT ISSRLFYDQH LFEQCNTAGE TINYGIQKYG FSPAFGVRIR
KNGQFIADMT LQNAQSYAEK HNDTLLKTAT TNMLSVGAQF TLDSRDNPLI PSTGSYTNIR
YSMTPILLDN HDIFWQVSGN HEENIHLGKK TTLQLTGLFG LSSSNMPLSE KFFLGGPGTT
YSQRFIGLKE NYLPCNNMAA AGMHLRYKPS FAILFPASLL LHYNVGNIWE EQNDISLAHL
IHGYGSSIIW ETPLGPARFT VSKTVPFPEK DPIKETASLQ FSDTIFYFSI GHNF
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