| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2381 |
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| Symbol | valS |
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| ID | 6460885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2465181 |
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| End bp | 2467892 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728566 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_002019189 |
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| Protein GI | 194337395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.81105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC AGACCGAAGT ATTCAATCTG GAAAAAATTT ACAATCATCA CGACGTCGAA
GAGCGGTGGG GAAGTGCGCA CTGGGAGGAG CTTGGCAGTT TCCATGCCGA AAGCTCCCGC
GTACTCGAAA CGGGCAAGGA GCCCTATACC GTGCTCATGC CTCCTCCCAA TGTGACCGGA
AGCCTGACGC TTGGCCATGT GCTGAACCAT ACCCTGCAGG ATATTTTTAT CCGCTACAGC
CGCATGACGG GCAAAGAGGC CCTCTGGCTT CCCGGTACCG ACCATGCAGG CATTGCAACG
CAGACGGTGG TGGAGCGCAA GCTGAAAAAA GAGGGAATTA CCCGCCACGA TCTTGGACGC
AAAGAGTTTC TCGGCCATGT CTGGCAATGG AGGGAGGAGT ATGGTGACCT TATTCTCCGG
CAGCTCCGTC GGCTCGGTAT CTCCTGTGAC TGGCGGCGCA ACCTCTTTAC CATGGATGAG
GGCGCCTCAA AAGCGGTCAT CAACGCCTTC ATCACGCTCT ACCGTGACGG ACTGATCTAT
CGTGGTACCC GTATCATCAA CTGGTGCCCC GTTTCACAGA CGGCGCTCTC TGATGAAGAG
GTGATCATGA AGTCGCGCAA GGACAGTCTG GTCTACATTC AATATGCCCT TGTCAGCCAC
CCCGGACGAT TTATCACCAT CGCAACCGTC AGGGCTGAAA CTATTCTGGC CGATGTTGCT
ATTGCCGTCA ACCCCGCTGA TCCCCGTTAC ACCGATCTGG TGGGCGAGCT TGCCATTGTG
CCGGTTGCGG GGCGTTATAT TCCCATTATT GCGGACGATT ACGTTGACAT TGAGTTTGGT
ACCGGTGCGC TGAAAATCAC TCCGGCACAC GATGCCAACG ACTATGAGGT GGCCAAACGC
CACAATCTTC CCATTTTGTC CGTTGTCGGC AAAGATGGCA AAATGACCGA TGAGTTCGGG
TATGGCGGGA TGGACCGCTT TGTTGCACGC GAAAAAATTC TCAAGGATCT CGAAGAGCTT
GGTAACCTTG TCCGGGTTGA AGAGTATGAA CACAATGTCG GCTACTCCGA ACGGGCTGAC
GTGGTGGTTG AACCCTATCT TTCCGAGCAG TGGTTTGTCA AAATGAAACC GCTGGCCGAA
GAGGCCCTGC AGGTTGTTAA TGATGGCGAA ATACGCTTTC ACCCCCCGCA CTGGATCAAC
ACCTACCGTC ACTGGATGGG CAATATCCGT GACTGGTGCA TCTCCCGTCA GCTCTGGTGG
GGACACCGCA TTCCTGCCTG GTACGACAGT GAGGGTAAGG TATGGGTTGC CGCATCATAC
GAAGAGGCCT GTCATCTTGC CGGTACCGAC AAACTGGTGC AGGATGATGA TGTGCTCGAC
ACCTGGTTCT CTTCATGGCT CTGGCCTCTG ACAACGCTCG GATGGACAGA GAAACAGAGT
GATAATGACG ATCTCAGAGC CTTTTATCCA ACCGACACAC TGGTAACCGG GCCGGACATC
ATCTTTTTCT GGGTCGCCAG AATGGTGATG GCAGGGCTCT ATTTCAAGGG GGCGGTTCCT
TTCCGCAACG TCTATTTTAC CAGCATTATC CGTGACATGA AGGGGCGCAA GCTTTCCAAG
TCACTTGGTA ATTCACCCGA CCCGATCAAG GTGATGGATA CCTACGGCAC CGATGCCCTG
CGCTTCACCA TTATCTATAT CGCTCCTCTC GGGCAGGATG TTTTGTTCGG TGAGGAAAAG
TGCGAACTCG GGCGGAATTT TGCCACCAAG ATATGGAACG CCTCCCGGCT TGTCTTCATG
CAGCGCGAAA AGTATTTCCG CGACCACGAA GAGTTTGCGG CCGTTTATCT CAACTTTGAT
CCCTCCTCAG TAACTGCTGA TCTGGCTGGT CAGTGGCTCC TTGCAGGATA TCATGGCATG
TTGGAACGCT ATCACACCGC ATTCACGCAG TTCAGGGTCA ACGATATTGT CAAGAATCTC
TATGACTTCT TCTGGCGCGA CTATTGCGAC TGGTATCTGG AAGCTCTCAA AGTCAGGCTT
TCAGGAGAGT TGACACGAGA GGATGCTCAA CAGACGGTTT GCCTTGCAGT TTATGTGCTT
GAGGGTACCC TGAAAGCGTT GCATCCGGTT ATGCCCTTCA TTACCGACGA GATATGGCAT
CAGGTGCTTC AGCGTTCGGC GGAAGAGAGC ATTGCCCTCT CGCCGATGCC CCTTTCCGAC
AGTGCACTTG CAGGGATTGA TCTCCGTGGT TTTTCCCTGA TACAGAAAGT CGTTACCGAA
ATCAGAAGCC TCCGATCACT CTTTGGTGTT CCTCATGGAA GCAGGGCAGA GGTTCTTCTC
AGACCGACCA ATGAGGGTGA CCGGCTACTT CTGCAAACCA ATCTGGCGCT GGTTGCTGCG
CTGGCTCAAT GTAATCCGCA ACTCATGGAT GGCGGTGAGC GTCCACCACA TGCTGCAGGT
TCCGTGGTCG AGGGGAATGA ACTATTTGTG CTGCTTGAAG GGTTGATATC GTTTGACAAA
GAGTGTGAAC GCCTTCAGAA AGAGATCGCT AATGTTTCCT CCTATGTTCT CTCGCTTCAG
AAAAAATTGT CGAACGGAGG ATTTGCTGAC CACGCGCCTG CCGATGTTAT TGCAAAAGAG
CGTGAAAAGC TCAGAGAGGC CGGGGAAACC CTCGAAAAAC TCAAAAGTAA TCTCGCTGTT
CTCAGCGACT GA
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| Protein sequence | MSDQTEVFNL EKIYNHHDVE ERWGSAHWEE LGSFHAESSR VLETGKEPYT VLMPPPNVTG
SLTLGHVLNH TLQDIFIRYS RMTGKEALWL PGTDHAGIAT QTVVERKLKK EGITRHDLGR
KEFLGHVWQW REEYGDLILR QLRRLGISCD WRRNLFTMDE GASKAVINAF ITLYRDGLIY
RGTRIINWCP VSQTALSDEE VIMKSRKDSL VYIQYALVSH PGRFITIATV RAETILADVA
IAVNPADPRY TDLVGELAIV PVAGRYIPII ADDYVDIEFG TGALKITPAH DANDYEVAKR
HNLPILSVVG KDGKMTDEFG YGGMDRFVAR EKILKDLEEL GNLVRVEEYE HNVGYSERAD
VVVEPYLSEQ WFVKMKPLAE EALQVVNDGE IRFHPPHWIN TYRHWMGNIR DWCISRQLWW
GHRIPAWYDS EGKVWVAASY EEACHLAGTD KLVQDDDVLD TWFSSWLWPL TTLGWTEKQS
DNDDLRAFYP TDTLVTGPDI IFFWVARMVM AGLYFKGAVP FRNVYFTSII RDMKGRKLSK
SLGNSPDPIK VMDTYGTDAL RFTIIYIAPL GQDVLFGEEK CELGRNFATK IWNASRLVFM
QREKYFRDHE EFAAVYLNFD PSSVTADLAG QWLLAGYHGM LERYHTAFTQ FRVNDIVKNL
YDFFWRDYCD WYLEALKVRL SGELTREDAQ QTVCLAVYVL EGTLKALHPV MPFITDEIWH
QVLQRSAEES IALSPMPLSD SALAGIDLRG FSLIQKVVTE IRSLRSLFGV PHGSRAEVLL
RPTNEGDRLL LQTNLALVAA LAQCNPQLMD GGERPPHAAG SVVEGNELFV LLEGLISFDK
ECERLQKEIA NVSSYVLSLQ KKLSNGGFAD HAPADVIAKE REKLREAGET LEKLKSNLAV
LSD
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