| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2380 |
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| Symbol | |
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| ID | 6462378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2464110 |
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| End bp | 2465009 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728565 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_002019188 |
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| Protein GI | 194337394 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGCAAC TCAAAATAAG CAAACAGATA ACCAATCGAG AGAGTCTCTC GCTTGACCGT
TACCTGCAGG AGATAGGAAA ATATGACCTG TTGACAGCCG AAGATGAGGT CAAACTGACG
AAGGCGATCA AGGAGGGTTT TGATATGCCT GTCGATACGA CCGAATACAA GAGGGCGAAA
CGCGCTCTCG ACAAGCTGAT CAAGGGTAAC CTGCGCTTTG TTGTTTCTGT CGCCAAACAG
TATCAGAATC AGGGGTTAAC CCTCGGAGAC CTGATCAATG AAGGGAATCT TGGTCTTATC
AAGGCCGCAA AGCGCTTTGA TGAAACCCGT GGCTTCAAGT TTATCTCCTA TGCCGTATGG
TGGATCCGCC AGTCCATTCT CCAGGCTCTG GCCGAACAGT CACGAATTGT AAGGCTTCCC
CTGAACCGGG TAGGAACGCT CAACAAAATC AGCAAGGCAT ACAGCCAGCT CGAACAGGAA
TTTGAACGCG ACCCCAACAC CAGGGAGCTT GCCACCCTGC TTGAAATGGA TTCGCAGGAC
GTTGCCGATA CCCTGAAAAT TGCAGGACGT CATGTTTCCG TCGATGCCCC GTTTGCACAG
GGTGATGATA ACCGACTGCT CGATGTGTTG CAGAACGACG GCCATCTGCC CGATTACGGC
CTGAACCGCG ACTCACTTAC CCTTGAGGTC GAGCGCTCTC TCTCCGTCCT TGCTCCAAGA
GAAGCCGATG TCATCAAGTC CTACTTTGGG ATTGGCATGG ATAACCCCCT CACCCTCGAA
GAGATCGGCG AAAAGTTCCG TCTTACCCGT GAACGCGTTC GCCAGATCAA GGAGAAGGCA
ATCCGCAGGC TCCGCCAGTC GGCATACAGC AAGATTCTGA AGGAGTACAT TGGAAGCTGA
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| Protein sequence | MRQLKISKQI TNRESLSLDR YLQEIGKYDL LTAEDEVKLT KAIKEGFDMP VDTTEYKRAK
RALDKLIKGN LRFVVSVAKQ YQNQGLTLGD LINEGNLGLI KAAKRFDETR GFKFISYAVW
WIRQSILQAL AEQSRIVRLP LNRVGTLNKI SKAYSQLEQE FERDPNTREL ATLLEMDSQD
VADTLKIAGR HVSVDAPFAQ GDDNRLLDVL QNDGHLPDYG LNRDSLTLEV ERSLSVLAPR
EADVIKSYFG IGMDNPLTLE EIGEKFRLTR ERVRQIKEKA IRRLRQSAYS KILKEYIGS
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