Gene Ppha_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2344 
Symbol 
ID6461626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2419160 
End bp2422732 
Gene Length3573 bp 
Protein Length1190 aa 
Translation table11 
GC content45% 
IMG OID642728532 
Productprotein of unknown function DUF323 
Protein accessionYP_002019155 
Protein GI194337361 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTTA CCTGGCTGCA TGTTTCGGAT TTCCACTTGA GCCCTCTCGG ATCCTATGAC 
GTTAATCAGG TGCTTAAAGC GCTGGTTGAA TCTGTTGAAC GATTTCGGCA AACAACAGAG
TGGAAACCGG ATCTGATTTT TGCTACAGGT GATATCGCAG GAAAGGGAGA TGTTGCGATT
TTTAAAGGCG GTGACGATGC TCCCGCTACC AAATTTTTTG ACAAACTGCT TCAAGCTGCA
GGGCAAGGCA GGGAGCGCTT GTTTATTGTT CCAGGCAACC ATGATGTTGA GCGAGATCAA
GGGCTTGTTC CACCCACCTT TCAAACAGAA GTAGATATTA ATAACTACTT TGAGAAAAGT
AAGCGTTATC ATTTTCTGAA GCTTCAGGCC TTTTCTGAAT GGTATAATGA TTATTTCGAG
GCTGTTAAAC CTGAAAGAAC TTTTCCCGAC AAATCAACTT GTGAACTAAT TCCTTACACG
CTCAGAAAAA ATGATGATGA AGTTTCGCTT AAACTGCTGC TTATCAACAG CGCCCTGTTT
TGTGAAGATG CCAGTAAAGA CATTGGAAAA CTCTGTATTG GTCGTTTTTG TCTTAACCCA
CTTATAGAGC AACTCGAATC GGAGAGGAAA AAAGGTGACC TCTCGCTTGT GATTGCGATG
ATACATCATC CGTTTTTTGT GCTCCATACA CTCGAGAGCA TTGCACTCAA GAATGTTTTG
TCCTCACAGG TTGACATTCT CTTGAATGGT CACTTGCATC AGACAGAAGT GAATTTCGGT
GAACTGGTAG AGCTTGGTTC GGGGGCTGCA TACTTCAGCG CTAATAGCTC AAAAAATGCC
ATGTATTGCC GGTTTGATGG CAAAAAAATA GAGGTTTATC CAATCTGCTA TTATGAAAAG
AGTTCTCAAT GGTCGGATGA TCCCAACGTT TTTTACAAAA CCAAAGAGGC AACCAGAAGT
TTCGAGATTC TGCGCCTGCG GAATTCCGCC GCACCAGACC CGGTCGTTAC AACTGAAACA
AATGGACATC CGGAAAATAA ATATGGGACG AGTTATCAGG AATTTCTTAT AGCGGCATTG
GATCACGTGC TTCCAACAGC GGTTCAAGGC TTTTCAGCAA AAGTAAGCCA AATATTTGTT
TCGTTGAGTC TTTCTGATAC ATGGCAGAGT GAAGAGCGTT ATTCTCCCGA AACAAAAGTG
TATGACAGGC AAAAAGAGGT AGACGGTTTT ACTGCAGAAG CCGTTATGCG TGCGGCATTT
AAAAAAAATC GCCTTTTGCT TGTCATTGGT GATCCTGGTC AAGGCAAAAC AACCCTGCTC
CAGCATTATG CACTCTCATG CATCGACAAA GAGCGATGTA AAGATTTTGG TTTTCCCGAA
CCGGTCATGG TTTTTTATCT CCAATTACGC GACTTGAAAA AAGGAGATAC TGGTTATTCA
GCACTTCCTG TCAATATTCT GGCATGGGCG CATACTGTTC CATCGTCAGA GAAAGAGAGA
CCGGAAAATT TAGAAACATT GATTTTCGAA TCGCTCTGTC AAAAAAAATC ATTGGTTTTA
CTTGATGGGC TCGATGAAAT CAGTGAGCTG GAAGAGAGAA AAGAGGTGTG TGAATGGATC
AAGAATACCA TTACTGACTT TCCCAAAGCC TGCTTTGTTG TCACCTCACG CCCGACAGGC
TACCGTCCCG TTGATGACAT TGAGATTCAA ATTCCTTTAA AGAGAGCTGA TATCCTTGAT
TTCAAGCCTG TACAACAAAA AACATTTTTA CAAAACTGGT TTACTGAAGT CTTTCTCAGC
AAAATTCCAA CCGACAGTGG AGACACTGAA GATCCGGAAT GGGAGAACCG TCAGAAAGAA
AAAGCCCTCG ATAAAGCAAG TGCTGTTATC AAATTTTTGA ACAAGGATGA AAATAAAAGT
TTACTGAAGC TGGCCGGAAT ACCGTTAATG TTGCAGATTA TGGCCATGCT CTGGAACGAG
GACGATACCT TGCCGGAAAG CCGGGCTACT CTCTATAAAA AAGCACTGGA TTATCTCCTT
GGTTATCAGT ACAAGCGGCG AAACATAGTC CCGAAGCTTC CCGAAGCAGA TGCCATTGGA
GTTCTCGCTC CAGTTGCACT CTGGATGCAG GAGGAGCTGA AAAAGGACGA AGCCGATCAG
GAAGTTATGA AGACAAGAAT GCAGAAAGAA TTAAACAAGA TACCAAAGAA GCAGAAGCCG
CCAAAAGCAA AGGCATTCAG TGACGACCTG ATTGATCGTG CCGGTTTGTT GGTGAGATAT
GGTCAGACTG ATTATGCCTT TCGTCACAAG TCATTCCGCG AATATCTGAC CGGTTTTCAG
CTCATGAAAA ATCCTGTAAT GGATCTCTCC TTACAGAAAC TGATTGAGCA TTTCAGCGAA
CCCTTTTGGG AAGAACCCAT CCGCTTCTTT TTTGGTCAGA TTGATGCAGA GAGCTTCAAT
ACCTTTATGC AAAACTTCTT CGATGTAGTG AGTGAAGAGG TGATTCAGTC AAAACAAGAG
CTGTTGCAAA CCATCATAGA GGAAACCCCG AAGGAAAAAA GAAAGATTGA TACGTTATGT
AAAAAGCTTC TGGATTCCGA AACAACACTA CGCCGACAGC AGGTGATTCT CGACTGCCTG
AAGACAATTG GGAATCCCGA AGCACTCAAT ACCCTTTATC AGTTCAGAGC AGGAAAACTT
GCAAAAAACG ATGATGTAGC TGATCGAGCG GAGGAGGTGA TTCTTGCTTT CGGCGGCAAA
GCGCTTGAGC GAAACATTGA AAAGAGTGTC AGCGGAAATC CTCTCTCTTT CCGGAATTCC
AATGAAGAAA ACTCAGAGTA CATCCTGATA CCGGGAGGAA GCTATATTTA TTCGGTGACA
GAAGAAATTG TGAGTGTGCC GGAACTCTAT GTCGCCAAGT ATCCGGTAAC AAACAAACTC
TATCGCTCTT TTATTGCAGC ACTTGAGGAA TCGGTAGCAT TACAGGAAGA GCTGTTCAAA
ATTGCATTAA ACAATACAGA GCATTCAACT GTTGCAAATT TTTTCAAAGA GGGTAAAAAC
GACCTTGCAG CTTTGTGTCG TTCAACCTAT GATGAAGATC GAAAATTCAG CGGCGCCGAA
CAGCCTGTCG TTGGTATTAC ATGGTATGCT GCTCAAGCCT ACTGTTTTTG GCTCTCACTG
TGTGCAGGCA AGCCTGACTC TTATCGCTTG CCAAACGACA TCCAGCGGGA GTGGGCGGCA
GGTGGAAAAC GGGAACCGAT ACCGCAGAAA GTTCGGGAGT ATCCCTGGTC AGATGAGAAG
GGTGAACCAA CACCAACGTT GGCCAACTTT GGTATGAATG TTGGATATAC AACACCCGTT
AACCGTTACC CCGAAGGAGC AACTCCGGAA GGTTTGTACG ATATGGCAGG TAATGTATGG
GAATGGTGCA ATGATTCGGT AGGTTCGGAC CGTGTGATTC GTGGCGGGAG CTGGAACTAC
GGTGCCGTGC GCTGTCGGTC GGCGTATCGG AACGGCAACA CCCCCGGTCG CCGGCGCAGC
GGCGTGGGCT TCCGCCCGGT TTTCGTCCCG TAG
 
Protein sequence
MALTWLHVSD FHLSPLGSYD VNQVLKALVE SVERFRQTTE WKPDLIFATG DIAGKGDVAI 
FKGGDDAPAT KFFDKLLQAA GQGRERLFIV PGNHDVERDQ GLVPPTFQTE VDINNYFEKS
KRYHFLKLQA FSEWYNDYFE AVKPERTFPD KSTCELIPYT LRKNDDEVSL KLLLINSALF
CEDASKDIGK LCIGRFCLNP LIEQLESERK KGDLSLVIAM IHHPFFVLHT LESIALKNVL
SSQVDILLNG HLHQTEVNFG ELVELGSGAA YFSANSSKNA MYCRFDGKKI EVYPICYYEK
SSQWSDDPNV FYKTKEATRS FEILRLRNSA APDPVVTTET NGHPENKYGT SYQEFLIAAL
DHVLPTAVQG FSAKVSQIFV SLSLSDTWQS EERYSPETKV YDRQKEVDGF TAEAVMRAAF
KKNRLLLVIG DPGQGKTTLL QHYALSCIDK ERCKDFGFPE PVMVFYLQLR DLKKGDTGYS
ALPVNILAWA HTVPSSEKER PENLETLIFE SLCQKKSLVL LDGLDEISEL EERKEVCEWI
KNTITDFPKA CFVVTSRPTG YRPVDDIEIQ IPLKRADILD FKPVQQKTFL QNWFTEVFLS
KIPTDSGDTE DPEWENRQKE KALDKASAVI KFLNKDENKS LLKLAGIPLM LQIMAMLWNE
DDTLPESRAT LYKKALDYLL GYQYKRRNIV PKLPEADAIG VLAPVALWMQ EELKKDEADQ
EVMKTRMQKE LNKIPKKQKP PKAKAFSDDL IDRAGLLVRY GQTDYAFRHK SFREYLTGFQ
LMKNPVMDLS LQKLIEHFSE PFWEEPIRFF FGQIDAESFN TFMQNFFDVV SEEVIQSKQE
LLQTIIEETP KEKRKIDTLC KKLLDSETTL RRQQVILDCL KTIGNPEALN TLYQFRAGKL
AKNDDVADRA EEVILAFGGK ALERNIEKSV SGNPLSFRNS NEENSEYILI PGGSYIYSVT
EEIVSVPELY VAKYPVTNKL YRSFIAALEE SVALQEELFK IALNNTEHST VANFFKEGKN
DLAALCRSTY DEDRKFSGAE QPVVGITWYA AQAYCFWLSL CAGKPDSYRL PNDIQREWAA
GGKREPIPQK VREYPWSDEK GEPTPTLANF GMNVGYTTPV NRYPEGATPE GLYDMAGNVW
EWCNDSVGSD RVIRGGSWNY GAVRCRSAYR NGNTPGRRRS GVGFRPVFVP