| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2319 |
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| Symbol | |
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| ID | 6461450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2395056 |
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| End bp | 2396792 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728508 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_002019131 |
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| Protein GI | 194337337 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000648814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAG AATCAAATCC ATATCTTGAT TTTGCGATAA ATTACCAATT TCCTGCGTTC
AGTGAACTGA CGGGAGTTGA CAAGATTGTC GCTTTTGGAG ATCATAGTCA TAAATGCCCT
GTGTATGTCC GGCAACTTCC TCCATGCACG GCTGAATGCC CGGCAGGAGA GGATATCCGT
GGCTATCACC GTCTGCTTAA GGGTGTTGAC AAATCTGATG ATGCGTGGAA AGCGGCATGG
GAACTGTTGG TTCAGGCCAA TCCATTCCCT GCTGTTATGG GCCGGATATG CCCGCATCCC
TGTGAAAGCG CCTGTAATCG TCAGTACCAT GATGAAAGTG TTGGAATCAA TGCTGTTGAG
CAGGCAATTG GTAATTATGG TATTGAAACG GGTCTTGAAC TTCCCGCTCC AGGGTCCGAC
ACCGGCAAAC GGGTTGCGGT TATCGGAGGT GGTCCTGCAG GGCTTTCCGC AGCCTATCAG
TTGCGTCGAA AAGGTCATGC CGTAACGATT TACGATGCTA ATGAAAAACT TGGTGGCATG
GTTCTCTACG GTATTATGGG CTATCGCGTC GACAGGAAAG TTCTTGAAAC CGAGATACAG
CGCATCATAA AGCTTGGTGT CGAAACAAAA ATGGGGGTTC GCGTCGGAAG AGATATCTCT
TTTGAGGAGC TGGAAAAAGA GTACGATGCC GTTTTCATGG GAGTTGGCGC CCAGGTCGGT
CGTGGATTGC CGATACCAGG ATTTGCCGAT ACTGCGGGAG CGACAAACGC TATTGACTTT
CTGACCAAAT ATGAGGTCGA GGGAGATGCA ATCTCAATTG GTAAAAAGGT GGTTGTTATC
GGTGACGGTA ACGTAGCCAT GGATGTGGCC CGCCTGGCCC TCCGTCTTGG TTCGGAAGCC
ATTGTGATTT CAGGAGTGCC AAGGGAGGAG ATGGCCTGTT TTTCAGATGA GTTTGATGAT
GCCGTGAGGG AAGGCGCCCA AATTCACTAT ACAACAGGCG CACTCGAAGT TCTTGTTGCC
GACAACGCCG TGAGCGGGTT GTTTTGCTCC AGAATGATCA AAAAGGTAAA AGGGGAGGAG
GGATGGAATT CACCGATACC TTTTTTCCGT TATCGCAATA CCGAAGAGAG CTTCCAGCTT
GAGGCCGATA TGGTTGTTGC TGCAATTGGA CAGACAACCG ATATGCGAGG TTTTGAAAGC
GTTACAGAGG GCCGTCCCTG GCTCAAGGTT GATCGTTATT TTCGTCTTTC CGGAAAGGAA
AAAGTTTTTG GTGGAGGCGA TGCCATACGC GTTGATTTGA TTACGACGGC GGTCGGTCAT
GGGCGCAAGG CTGCAAATTC GATTGATGCC TTCCTGAAAG GTGAAGCGCT TTCCGACCAG
GGGTATCAGG AGGTGACAAA GGTACAGAAA CAGGATATTC TTTACTTTGA ACATTCTGAT
CAACTCAAAA GAGAGAGTGT TGAACTTGAA GAGGTCGTTG GCAACCATGA TGAGCTGCTT
CAGGCTTTGA CAAAGGAGCA GGCCGAGCAG GAATCTGCGC GTTGCATGAG TTGTGGACTC
TGTTTTGACT GTAAACAGTG TCTCTCTTTC TGTCCCCAGG AGGCGGTCAC CCGTTTCAGG
GATAACCCTG TTGGCGAGGT GGTCTATACC AATTATTCAA AATGTGTCGG GTGCCATATC
TGTGCACTGG TGTGTCCCTC CGGTTACATT CAGATGGGAA TGGGAGAAGG TCTTTGA
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| Protein sequence | MKVESNPYLD FAINYQFPAF SELTGVDKIV AFGDHSHKCP VYVRQLPPCT AECPAGEDIR
GYHRLLKGVD KSDDAWKAAW ELLVQANPFP AVMGRICPHP CESACNRQYH DESVGINAVE
QAIGNYGIET GLELPAPGSD TGKRVAVIGG GPAGLSAAYQ LRRKGHAVTI YDANEKLGGM
VLYGIMGYRV DRKVLETEIQ RIIKLGVETK MGVRVGRDIS FEELEKEYDA VFMGVGAQVG
RGLPIPGFAD TAGATNAIDF LTKYEVEGDA ISIGKKVVVI GDGNVAMDVA RLALRLGSEA
IVISGVPREE MACFSDEFDD AVREGAQIHY TTGALEVLVA DNAVSGLFCS RMIKKVKGEE
GWNSPIPFFR YRNTEESFQL EADMVVAAIG QTTDMRGFES VTEGRPWLKV DRYFRLSGKE
KVFGGGDAIR VDLITTAVGH GRKAANSIDA FLKGEALSDQ GYQEVTKVQK QDILYFEHSD
QLKRESVELE EVVGNHDELL QALTKEQAEQ ESARCMSCGL CFDCKQCLSF CPQEAVTRFR
DNPVGEVVYT NYSKCVGCHI CALVCPSGYI QMGMGEGL
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