| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2310 |
|---|
| Symbol | |
|---|
| ID | 6462171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2389190 |
|---|
| End bp | 2389966 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728499 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002019122 |
|---|
| Protein GI | 194337328 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG AGAGAAGAGG ATTTATCAAG AAAACCGGAG CAGGAATCCT TGCAGGCATT
GGAGCTGCTT CAGGTCTTTT TCTGCATATA CCGATGGAAC AGACGGATGC GTCCGTTTTC
TCTGACAGGA AGAGCACCGG CACTACCCGC TGGGGTATGC TGATTGATAT GCGAACATGC
AGGGAAGGGT GTCAAAAGTG TGTTGATGCC TGCCACAAAA GCCATAATGT CCCCGACTTC
GGCCATTCAC GGCATGAAAT CAAGTGGATA GAGAAAAGCC CGTACAGCAC ACTCTTTCCA
ACGGCTCCCC AGGAGTTTGC CGATAAAGAG AGAGGCAACA GAACCATTCC ATCGCTTTGC
AATCATTGTG CCGAGCCACC CTGTGTCCGT TCATGTCCGA CCGAGGCAGT ATTCAAACGC
AATGATGGTA TTGTCGCATT TGATTATCAC CGTTGTATTG GTTGCCGTTC CTGTATGGCA
TCCTGCCCCT ATGGAGCTGT CAGCTTTAAC TGGAGAGAAC CGAGGCCAGC CCTCAAGGCA
ATCAGTGAGA GTTATCCAAC AAGGGAGATG GGGGTTGCCG AAAAGTGCAA CTTCTGTTCC
GAACGTCTGC TGAAGGGGGC TTTGCCCGCC TGTGTTGAAG CGTGTCCTGA AAAAACACTG
ATTTTTGGTG ACCTTAATGA TCCCGAGTCC GGGATTCGCA AGCTTCTTGC AAGCAATCAG
ACCATGCAAA GAAAACCTGA ACTGGGAACA CTCCCTTCAG TTTTTTACAT CATCTAA
|
|---|
| Protein sequence | MNEERRGFIK KTGAGILAGI GAASGLFLHI PMEQTDASVF SDRKSTGTTR WGMLIDMRTC
REGCQKCVDA CHKSHNVPDF GHSRHEIKWI EKSPYSTLFP TAPQEFADKE RGNRTIPSLC
NHCAEPPCVR SCPTEAVFKR NDGIVAFDYH RCIGCRSCMA SCPYGAVSFN WREPRPALKA
ISESYPTREM GVAEKCNFCS ERLLKGALPA CVEACPEKTL IFGDLNDPES GIRKLLASNQ
TMQRKPELGT LPSVFYII
|
|---|
| |