| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2282 |
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| Symbol | |
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| ID | 6460933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2359731 |
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| End bp | 2360573 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728470 |
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| Product | endonuclease IV |
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| Protein accession | YP_002019094 |
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| Protein GI | 194337300 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000448343 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGG TTGGAGCACA TGTCAGTACT GCCGGAGGGG TGGAAAATGC TCCCCTGCAG
GCGACCAGCA TCGGGGCAAA AGCTTTTGCA CTCTTTACCA AAAATCAGCG GCAGTGGAAA
GCACCGAAAC TGACGACCTC CTCAATTGAG GCTTTCAAAA AAAACTGTGA GGCTGGAGGA
TTCCGCCCTG AACACATCCT GCCGCACGAC AGCTATCTGA TTAACCTCGG CAGCCCTGAT
CCTGAGAAGC TCCAGCGTGC ACGTGAAGCT TTTATTGAGG AGATGCAACG GGCTGAAGAG
CTTGGATTGC TGCTGCTGAA CTTTCATCCG GGTAGCCATC TCAAGGAGAT TGCGGAAGAG
CGATGCCTGG AGCTGATTGC TGAATCCATC AACAGGGCGC TTGATGCAAC CAAAACCGTT
ACTGCGGTGA TTGAGAATAC CGCCGGACAG GGCACCAATC TCGGCAACCG GTTTGAACAG
TTGGCATTTC TTGTTGACCG GATTGAGGAT AAAACGAGAG TTGGAGTCTG TCTCGACACC
TGCCACCTCT TCGCCAGCGG CTACGACCTG CAAACAACCG CAGCAATTGA GTCAACCTTT
ATGGAGTTCG ACCGGATTGT TGGCCTCCGC TACCTGCGCG GGATGCACCT GAATGACGCA
ATGCAGCCGC TCGGCAGCCG GATTGACCGT CATGCGGGTA TCGGCAAGGG AACGATAGGG
ATGGATGCTT TCAGATGGAT CATGAATAAT CCTGCCTGTG AAGAGATTCC CCTGATCCTT
GAAACACCGG ATTCTGCCGC CTGGAGCGAA GAGATCAGCC TTCTCTACGC TCTTGAGCAG
TAA
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| Protein sequence | MKRVGAHVST AGGVENAPLQ ATSIGAKAFA LFTKNQRQWK APKLTTSSIE AFKKNCEAGG
FRPEHILPHD SYLINLGSPD PEKLQRAREA FIEEMQRAEE LGLLLLNFHP GSHLKEIAEE
RCLELIAESI NRALDATKTV TAVIENTAGQ GTNLGNRFEQ LAFLVDRIED KTRVGVCLDT
CHLFASGYDL QTTAAIESTF MEFDRIVGLR YLRGMHLNDA MQPLGSRIDR HAGIGKGTIG
MDAFRWIMNN PACEEIPLIL ETPDSAAWSE EISLLYALEQ
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