Gene Ppha_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2205 
Symbol 
ID6461081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp2286738 
End bp2287376 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID642728396 
Productporin, opacity type 
Protein accessionYP_002019020 
Protein GI194337226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.570282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC ATCTTGCCTT GTTGGGAGCA ATTCTTGCTG CAGGCACTCT TGCAGCGCCC 
TCCTATGCCG CATCATCACC TTATGTCAGC GGCAATATCG GAGTCTCATC GTTCAATGAT 
ACCGCATTCA AAAGCCCTTC GACCAACGCT ACCCTGGCTG AAATGACCTT CAAATCCGGT 
ATCGACCTGC GGTGTGCTGC CGGACTCGAT TTTGAGGATT ACAGGATCGA GGCTGAACTC 
AGCTATCAGA AGGGCGACGT GAACAGAGGC ACAGAACATG GAGGTACTGC CGATATGCAA 
GGCTTTAAAT CAGTAACCTC CCTTATGGCA AATGGCTACT ATGATTTCAA TCCAGAAGGC 
ATTAACCCAT ATCTCACTGG GGGCCTTGGC TGCAGCAGGG TAAATTTCGA TAACGTAAAA 
GTCAAAGGCG CTCCCTATCC CGGACTTACC GAGCACCATA CCGTACTTGG TTATCAGCTC 
GGTGCAGGCA TTGGTATTCC AATAACGAGG GAAGTCACCG TTGATGCACA GTACCGTTAT 
TCCGGACATA GCCGCATCAG CATGGAAAAT CCTGATTTTC ATTACGATTT CAAATCATCA 
GGCAGCAGTT TTCTGCTTGG TCTGAGGGTT GGACTGTAA
 
Protein sequence
MKKHLALLGA ILAAGTLAAP SYAASSPYVS GNIGVSSFND TAFKSPSTNA TLAEMTFKSG 
IDLRCAAGLD FEDYRIEAEL SYQKGDVNRG TEHGGTADMQ GFKSVTSLMA NGYYDFNPEG 
INPYLTGGLG CSRVNFDNVK VKGAPYPGLT EHHTVLGYQL GAGIGIPITR EVTVDAQYRY 
SGHSRISMEN PDFHYDFKSS GSSFLLGLRV GL