| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2173 |
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| Symbol | |
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| ID | 6461934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2258403 |
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| End bp | 2259461 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728369 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_002018993 |
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| Protein GI | 194337199 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGA TTGTCTCAAT ACCAGGTGAC GGTATAGGCC CGGAAGTGGT TGCAGGAGCT
GTTTCAGTAC TGGAGCAGCT CTCCAGAAAA CATGGCTTTG AAATTGTGAT TGAAGAGCAC
CCCTTTGGCG GCGCCTCCTG GGAACTGCAT GGAGAGATGC TCACCCAGGC AACGCTTGAT
GCCTGCCGGA ACTGCGATGC CGTACTGCTT GGAGCCGTTG GCGGCCCCAA ATGGGAGAGC
CTGCCACACG AACACAAGCC GGAAGCTGCG CTGCTCAAAA TCCGAAAAGA GCTTCAACTC
TTTGCCAACC TCAGACCGGC AAAAGTCTAC GACGCACTGA TCGACGCATC CTCACTCAAA
GCAGATGTGG TTCGTGGCAC CGATTTCCTT GTTTTCAGAG AACTTACCGG CGGCATCTAT
TTCGGCCAGC CACGCGGCTT CGATGAAAAC CGGGGCTGGA ACACCATGGT CTATGAACGC
TATGAAGTTG AGCGCATCGC CCGTCTGGCC TTTGAAACAG CCCGGAAACG GAAGGGCAAG
GTCGTCTCGA TCGACAAGGC AAATGTACTT GAAGTATCAC AGCTCTGGAG AAATGTGGTG
CATGAACTGC ACAAGGAGTT TGCCGATGTG GAGCTGAGCG ACATGTATGT AGACAACGCT
GCAATGCAGA TTGTCCGCAA TCCGAAACAG TTTGATGTGA TTGTAACAAG CAACCTCTTT
GGTGACATTT TGAGCGACAT TGCAGGCATG ATTACCGGCA GTCTCGGTAT GCTCCCTTCT
GCAAGCATCG GTACAAAATA TGCCCTCTAC GAACCAATCC ACGGAAGTGC ACCGGACATT
GCCAGCCAGA ACAAGGCCAA CCCGATAGCC ACCATAGCAT CGGTAGCCAT GATGTTCGAA
CACAGCTTCA AAGTTCCGGA GATTGCCCGT GAGATCGAGC AGGCAATTGA GTCCGCCCTT
GCCTCCGGCT GCCGGACAGC AGACATAGCC AATACAGGTG ACAGGGTGAT TTCAACAACA
GAGATGACAG AAGCAATTGT CAGGCACCTC GGCGCCTGA
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| Protein sequence | MYKIVSIPGD GIGPEVVAGA VSVLEQLSRK HGFEIVIEEH PFGGASWELH GEMLTQATLD
ACRNCDAVLL GAVGGPKWES LPHEHKPEAA LLKIRKELQL FANLRPAKVY DALIDASSLK
ADVVRGTDFL VFRELTGGIY FGQPRGFDEN RGWNTMVYER YEVERIARLA FETARKRKGK
VVSIDKANVL EVSQLWRNVV HELHKEFADV ELSDMYVDNA AMQIVRNPKQ FDVIVTSNLF
GDILSDIAGM ITGSLGMLPS ASIGTKYALY EPIHGSAPDI ASQNKANPIA TIASVAMMFE
HSFKVPEIAR EIEQAIESAL ASGCRTADIA NTGDRVISTT EMTEAIVRHL GA
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