| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2168 |
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| Symbol | |
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| ID | 6462024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2251238 |
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| End bp | 2252959 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728364 |
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| Product | acetolactate synthase, large subunit, biosynthetic type |
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| Protein accession | YP_002018988 |
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| Protein GI | 194337194 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAT CAGGCCAAAC ACTCAATGGC TCAGAAATAT TTTTCGAATG TCTGCGACGT
GAAAACGTTG AATATATTTT CGGCTATCCG GGCGGATCTC TGCTGAAAGT TTACGAGACA
CTCTATGATA TCGAAGACAT CAAGCACATT CTGGTCCGTC ATGAACAGGG CGCAACCCAC
ATGGCCGAGG GATATGCCCG CGCCACGGGA AAGCCCGGTG TTGTTCTTGT CACCTCCGGC
CCCGGAGCAA CAAACACCGT CACCGGAATT GCCAACGCCT ATATGGACTC CTCTCCAATG
GTGGTCTTTA CCGGACAGGT TCCCAGCTCA CTGATTGGCA ACGACGCCTT TCAGGAGGCT
GATATTGTGG GCATCACCCG ACCGATAACC AAGCACAACT TCCTTGTCAA GGATGTCAGG
GAGCTTGCCA TAACCATCCG AAAAGCCTTT TTCCTTGCAA CAAACGGCAG GCCAGGACCG
GTTCTTGTTG ATATGCCAAA AGACATCCTG AATGCATCAT GCCTCTTTCA GTGGCCTGAA
ACGGTTGATA TCCGAGGCTT CAAACCAACC CTCAAATGCC ACATCAACCA GATTCAAAAG
GCGGCGCATA AAATTGCCAA TGCAAAACGC CCCCTTCTTT ACATCGGTGG CGGGGTTATC
AGTGCGGAAG CATCCGAAGA GCTCCGCGCC TTTGCCATAC AGCAGAATAT ACCGGTCACC
ATGACCCTTC AGGGGCTTGG TTCCTTTCCC GGAAACCATC CACTCAGCAT GGGGATGCTC
GGCATGCACG GCACCTACTG GGCAAACCGT GCGGTCAATG CCTGTGATCT CCTGATTGCT
GTTGGTGCAC GCTTCGACGA CCGGGTCACC GGCAAAGTAG ATACCTTTGC ACCACAGGCA
TACAAGATCC ATAATGACAT CGACCCCACC AACGTTGACA AAAACGTCAA GGTTGACCTG
CCCATTGTTG GTGACGCAAA ACACTTTCTC TCTTCACTCA TCGAAGAGAT GCCCGACACG
GTCGAAGAGC GCACAGCATG GCTTGCCCAA ATCCATGAGT GGCAGGAGAT GTGCCCGCTG
ACCTACAAAA GCGATGACAA CGAGCTCAGA ACCGAATTTG TTATTGACGA AGTTTCAAAA
CAAACCCAGG GCAACGCCGT AGTAGTCACC GATGTAGGCC AGCATCAGAT GTGGACTTCG
CAGTTCTATA CCTTCATCAA TCCACGATCG ATCATCACCA GCGGTGGACT CGGCACCATG
GGCTACGGCT TGCCTGCTGC CATCGGAGCC GCCTACGGCA TTACGGATCG CCCGGTTGTT
CTCTTCAGCG GAGATGGAGG CTTTATGATG AATGTCCAGG AGCTTGTTAC AGCGGTACAT
GGTAAAGTCC CGATAAAGAT CTTCCTGATC AACAACAGCT TTCTCGGTAT GGTCCGCCAG
TGGCAAGAGC TTTTCCACCA GGAAAAATAC TCCTTTACCG ATATTGGCGA CAGCAACCCC
GACTTTGTCA AGGTTGCTGA AGCATTCGGC TGCAAGGCCA TCATGGCCGA CAATCCTGAT
CGTGCCAGAG AGGCGATCAA GGAGGCGCTT GCCTGGAACG AAGGGCCGGT TCTTGTTGAT
TTCAGGGTTT TCAAAAAAGA TATGGTCTTC CCTATGGTTC CCGCCGGAGG CTCAATTTCA
GATATGCTCC TGGAACGGTT GAATCCAAAA ACAATGGTCT GA
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| Protein sequence | MQASGQTLNG SEIFFECLRR ENVEYIFGYP GGSLLKVYET LYDIEDIKHI LVRHEQGATH
MAEGYARATG KPGVVLVTSG PGATNTVTGI ANAYMDSSPM VVFTGQVPSS LIGNDAFQEA
DIVGITRPIT KHNFLVKDVR ELAITIRKAF FLATNGRPGP VLVDMPKDIL NASCLFQWPE
TVDIRGFKPT LKCHINQIQK AAHKIANAKR PLLYIGGGVI SAEASEELRA FAIQQNIPVT
MTLQGLGSFP GNHPLSMGML GMHGTYWANR AVNACDLLIA VGARFDDRVT GKVDTFAPQA
YKIHNDIDPT NVDKNVKVDL PIVGDAKHFL SSLIEEMPDT VEERTAWLAQ IHEWQEMCPL
TYKSDDNELR TEFVIDEVSK QTQGNAVVVT DVGQHQMWTS QFYTFINPRS IITSGGLGTM
GYGLPAAIGA AYGITDRPVV LFSGDGGFMM NVQELVTAVH GKVPIKIFLI NNSFLGMVRQ
WQELFHQEKY SFTDIGDSNP DFVKVAEAFG CKAIMADNPD RAREAIKEAL AWNEGPVLVD
FRVFKKDMVF PMVPAGGSIS DMLLERLNPK TMV
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