| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2160 |
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| Symbol | |
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| ID | 6462207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2243473 |
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| End bp | 2243946 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728356 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_002018980 |
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| Protein GI | 194337186 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000805861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTA TGAAGCCGTT ATTGAGAAGT CTTGTTATTC CGACCATGCT GTTTCTTGGT
GCATGTGGTT GCGGAAAAGA GGTCGTTGTG GCCCCACCAC CACCACCACT TCCTCCTCCA
CCTCCGCCAG TTGTGGTTGT AATGCCTGGT CTTGGCGATG TTTTCTATGA TTTTGACCGT
TCTGAGCTCC GCGCAGATGC CGTTGAGCAG TTGAAAACCA ATTTCAACTG GATACAGGCA
AATACAGAGA AGAGTGTCAT CATCGAAGGG CATTGCGATG AAAGAGGCAC TGCGGAGTAT
AACCTTGCTC TTGGCCAGCG CCGTGCAAAC AGTGCAAAGG ATTACATCGT CAATTTGGGT
GTTGCTCCTG TCCGTCTGAA GACGGTTAGT TTCGGTGAGG AAAAACCATT TGCTGACGGC
AGCAATGAAG AGGCATGGGC TCAGAACAGA AGGGCACACT TTGTTGCGGA ATAA
|
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| Protein sequence | MKTMKPLLRS LVIPTMLFLG ACGCGKEVVV APPPPPLPPP PPPVVVVMPG LGDVFYDFDR
SELRADAVEQ LKTNFNWIQA NTEKSVIIEG HCDERGTAEY NLALGQRRAN SAKDYIVNLG
VAPVRLKTVS FGEEKPFADG SNEEAWAQNR RAHFVAE
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