| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2159 |
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| Symbol | |
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| ID | 6462310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2242867 |
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| End bp | 2243388 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728355 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_002018979 |
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| Protein GI | 194337185 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00109799 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAA AAATAAACGG CATCATTGTT CTGGCCTTGA TGGTGACCGC TGGATGTTCA
TCAAAAAGTG CAGTGACCCC TGATGCAGGG AGTGCAGGGA GTGGTTCCGC ATCATTACCT
TCATCGTCGT CGCCGTCTTT ACCATTGTTG CCATCCTCAC CATCCGGTTA TGGATTTGAT
CAATGGCAAA CCGGACCTCT GGGCGATGTG TTTTTTGATT ATGACAGCGC TACGCTGAGT
GCCGAGGCTC AGGAGCAACT CCACCAAAAT GGAGTATGGA TGGGAAGCAA TGCTCGCAAA
GGAGCTCTTA TTGAAGGTCA TTGTGATGAG AGGGGTACTT CAGAATACAA TCTTGCGCTT
GGCGATCGCA GGGCGATAAG TGCTAAAGAG TATCTGGTCA GGTTTGGTGT GGCTCCATCC
CGTCTTGAAA CGGTGAGTTA TGGCGAAGAG CGTCCATTTG CTGCCGGCAG TAATGAAGAG
TCCTGGGCAA AAAACCGTCG GGCGCATTTT GTCGTAAAAT AA
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| Protein sequence | MTKKINGIIV LALMVTAGCS SKSAVTPDAG SAGSGSASLP SSSSPSLPLL PSSPSGYGFD
QWQTGPLGDV FFDYDSATLS AEAQEQLHQN GVWMGSNARK GALIEGHCDE RGTSEYNLAL
GDRRAISAKE YLVRFGVAPS RLETVSYGEE RPFAAGSNEE SWAKNRRAHF VVK
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