Gene Ppha_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2146 
Symbol 
ID6462520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2228231 
End bp2229214 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID642728342 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002018966 
Protein GI194337172 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTCTTGAACT GAAAAATCTC AAGACCTACT ACTCAACCGA TAATGGCATT 
GCAAAAGCTG TTGATGGTGT GAGTTTTTCT CTTGGGAGGA ACCGTACGCT GGGAATTGTC 
GGGGAATCCG GTTGCGGAAA GTCGGTGACA GCACTCTCTC TGATGCGTCT TGTGCCCATG 
CCGCCAGGAT ATTTTGCTGG AGGAGAGATT TTCTGGAAGG GAAGAGATCT TCTGAAGCTG 
TCGGAAGAGG AGATGCGCCA CCTGAGAGGC AATGAGATTG CCATGATCTT CCAGGAACCG 
ATGAGTTCGC TCAATCCAGT CTTTACCTGC GGCAGCCAGA TAATGGAGCA GATTCTTATT 
CATCGTGACC TCAATCATGC AGAGGCAAAA AAACGCTCCG TCGAGCTGCT CCACCTGGTC 
GGAATTCCGA ACCCTGCGGA GCGCTTTTCA TCTTATCCGC ACGAACTTTC AGGTGGTATG 
CGTCAGCGGG TGATGATTGC CATGGCGCTC TCCTGCAATC CCGAGCTGCT CATTGCTGAT 
GAACCGACTA CGGCGCTTGA TGTCACCGTT CAGGCACAGA TTCTTGACCT TATCGGTAAA 
CTGCAGTCCG ATAACGCGAT GAGCGTGATG CTCATTACCC ACGACTTCGG GGTTGTGGCA 
GAGTTATGTG AAGAGGTGCT TGTCATGTAT GCATCAAGAG TGGTTGAGAC CGGTTCGGTT 
CAGCAGCTCT TTAATAATCC ACTCCACCCC TATACCAGAG GGTTGCTGCA CTCTATTCCT 
CGTCTCGGCT CTTCAAAAGA GCGCCTTCAT GTCATTGAAG GCAATGTGCC GAGCGCAGTA 
AACCTGCCTG AAGGGTGCCG GTTCGCTGGA AGATGCCCTG AGGCTGATGC TCATTGTCGT 
CAGGAACAGC CTGAGCTGGT TGTTTATGAA GCAGGCCACG AGGCAGCTTG CTGGAAAGTT 
GGGAGTCACA GAGGCTTCCT TTGA
 
Protein sequence
MEKILELKNL KTYYSTDNGI AKAVDGVSFS LGRNRTLGIV GESGCGKSVT ALSLMRLVPM 
PPGYFAGGEI FWKGRDLLKL SEEEMRHLRG NEIAMIFQEP MSSLNPVFTC GSQIMEQILI 
HRDLNHAEAK KRSVELLHLV GIPNPAERFS SYPHELSGGM RQRVMIAMAL SCNPELLIAD 
EPTTALDVTV QAQILDLIGK LQSDNAMSVM LITHDFGVVA ELCEEVLVMY ASRVVETGSV 
QQLFNNPLHP YTRGLLHSIP RLGSSKERLH VIEGNVPSAV NLPEGCRFAG RCPEADAHCR 
QEQPELVVYE AGHEAACWKV GSHRGFL