Gene Ppha_2074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2074 
Symbol 
ID6462806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2162918 
End bp2164309 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content50% 
IMG OID642728268 
Productcytochrome c oxidase subunit I 
Protein accessionYP_002018898 
Protein GI194337104 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG CAGGGTACAA CTACAGGATA GTGCGCGGTT TTGCCTTTTC GGCGCTTTTC 
TGGCTTATCA TTGGTCTGGT CGTCGGGCTC TGGATAGCCT TCGAAATGTT CAATCCGGCA
CTCAACCTTA CCCCCTGGCT CAGTTTCGGG CGGTTGCGTG TTGTGCATAC CAATGGTCTC
GGTCTTGGCT TCGGACTCGC AGGTATTTTT GCAACCTCCT ACTATATCCT GCAGCGCCTG
ACGAGAGTAC CGCTTCCCTT TCCCCGACTT GCTCAAGCTC ATCTCTACCT CTTCAATGCA
GCAATAGCGC TGGCAGCCGT GAGCCTTTTT GCGGGAATGA ACACCACAAA AGAGTACGCT
GAACTTGAAT GGCCTCTTGA CATTGGTGTT GTCATTTTCT GGGTCATGTT TGCCGTCAAT
GTCTTTGGCA CGCTGATCAA ACGTCGCGAA AAGCAGATGT ACATCTCCCT CTGGTACATC
ATCGCCATGA CCGTCACCAT TGCCATTCTT TACATTGTCA ACAACCTTGA GATTCCCGTC
ACACTCTTCA AGTCCTACAG TATCTATTCA GGTGCAAACG ATGCCAATGT GGAGTGGTGG
TACGGGCACA ACATTGTGGG ATTCATCTTT ACGGTTCCGA TACTGGCGAT GTTCTACTAT
TTTCTTCCAA AAGCCACAGG CCTTCCCATC TACAGCCATC GGCTCTCCAT CATCTCTTTC
TGGGCGCTGA TCTTTGCCTA TCTCTGGACT GGCGCACATC ACCTTATGCT CACCCCTCTG
CCGGAGTGGA TTCAGACCGT TGCAATCGCC TTCTCCATTT TCCTGATTGC TCCGTCATGG
GGCTCTGTAG TCAATGGCTA TTACACGCTG CAGGGAAACT GGGAGCAGAT GCGCACCAAT
TATCTGGTCA AGTTCTTTAT TGCGGGCATC ACCTTTTATG GTCTTCAGAC CCTTCAGGGG
CCCCTGCAGG GATTACGCAC CCTCAATGCT TTCTTTCATT ATACTGACTG GGTGGTCGGG
CATGTGCACA TGGGAACCAT GGGATGGGTG ACCATGATCA TTTCGGCATC GTTCTACTAT
ATGATTCCAC GCATTACCGA CACCGAGCTC TACAGCATCA AACTCGCCAA CAGCCATTTC
TGGCTCATCC TTGTTGGTCA GCTCACCTGG ACCATTACCA TGTGGATCGC AGGAATCCAG
CAAGGAGCGA TGTGGAAAGC AACCAACCCG GATGGTTCGC TGATGTATAA TTTTCTTGAT
ACCGTCACCT CTCTCTATCC CTATTACCGG TTGCGCTTTG CCGCCGGGAT AATCTATTTT
ATCGGTATAC TGGTTTTCGC CTGGAATCTG ATCATGACAG TACGCCAGCA ACCTCAACAG
AGTGAAGCTT AA
 
Protein sequence
MSEAGYNYRI VRGFAFSALF WLIIGLVVGL WIAFEMFNPA LNLTPWLSFG RLRVVHTNGL 
GLGFGLAGIF ATSYYILQRL TRVPLPFPRL AQAHLYLFNA AIALAAVSLF AGMNTTKEYA
ELEWPLDIGV VIFWVMFAVN VFGTLIKRRE KQMYISLWYI IAMTVTIAIL YIVNNLEIPV
TLFKSYSIYS GANDANVEWW YGHNIVGFIF TVPILAMFYY FLPKATGLPI YSHRLSIISF
WALIFAYLWT GAHHLMLTPL PEWIQTVAIA FSIFLIAPSW GSVVNGYYTL QGNWEQMRTN
YLVKFFIAGI TFYGLQTLQG PLQGLRTLNA FFHYTDWVVG HVHMGTMGWV TMIISASFYY
MIPRITDTEL YSIKLANSHF WLILVGQLTW TITMWIAGIQ QGAMWKATNP DGSLMYNFLD
TVTSLYPYYR LRFAAGIIYF IGILVFAWNL IMTVRQQPQQ SEA