Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2074 |
Symbol | |
ID | 6462806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2162918 |
End bp | 2164309 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728268 |
Product | cytochrome c oxidase subunit I |
Protein accession | YP_002018898 |
Protein GI | 194337104 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG CAGGGTACAA CTACAGGATA GTGCGCGGTT TTGCCTTTTC GGCGCTTTTC TGGCTTATCA TTGGTCTGGT CGTCGGGCTC TGGATAGCCT TCGAAATGTT CAATCCGGCA CTCAACCTTA CCCCCTGGCT CAGTTTCGGG CGGTTGCGTG TTGTGCATAC CAATGGTCTC GGTCTTGGCT TCGGACTCGC AGGTATTTTT GCAACCTCCT ACTATATCCT GCAGCGCCTG ACGAGAGTAC CGCTTCCCTT TCCCCGACTT GCTCAAGCTC ATCTCTACCT CTTCAATGCA GCAATAGCGC TGGCAGCCGT GAGCCTTTTT GCGGGAATGA ACACCACAAA AGAGTACGCT GAACTTGAAT GGCCTCTTGA CATTGGTGTT GTCATTTTCT GGGTCATGTT TGCCGTCAAT GTCTTTGGCA CGCTGATCAA ACGTCGCGAA AAGCAGATGT ACATCTCCCT CTGGTACATC ATCGCCATGA CCGTCACCAT TGCCATTCTT TACATTGTCA ACAACCTTGA GATTCCCGTC ACACTCTTCA AGTCCTACAG TATCTATTCA GGTGCAAACG ATGCCAATGT GGAGTGGTGG TACGGGCACA ACATTGTGGG ATTCATCTTT ACGGTTCCGA TACTGGCGAT GTTCTACTAT TTTCTTCCAA AAGCCACAGG CCTTCCCATC TACAGCCATC GGCTCTCCAT CATCTCTTTC TGGGCGCTGA TCTTTGCCTA TCTCTGGACT GGCGCACATC ACCTTATGCT CACCCCTCTG CCGGAGTGGA TTCAGACCGT TGCAATCGCC TTCTCCATTT TCCTGATTGC TCCGTCATGG GGCTCTGTAG TCAATGGCTA TTACACGCTG CAGGGAAACT GGGAGCAGAT GCGCACCAAT TATCTGGTCA AGTTCTTTAT TGCGGGCATC ACCTTTTATG GTCTTCAGAC CCTTCAGGGG CCCCTGCAGG GATTACGCAC CCTCAATGCT TTCTTTCATT ATACTGACTG GGTGGTCGGG CATGTGCACA TGGGAACCAT GGGATGGGTG ACCATGATCA TTTCGGCATC GTTCTACTAT ATGATTCCAC GCATTACCGA CACCGAGCTC TACAGCATCA AACTCGCCAA CAGCCATTTC TGGCTCATCC TTGTTGGTCA GCTCACCTGG ACCATTACCA TGTGGATCGC AGGAATCCAG CAAGGAGCGA TGTGGAAAGC AACCAACCCG GATGGTTCGC TGATGTATAA TTTTCTTGAT ACCGTCACCT CTCTCTATCC CTATTACCGG TTGCGCTTTG CCGCCGGGAT AATCTATTTT ATCGGTATAC TGGTTTTCGC CTGGAATCTG ATCATGACAG TACGCCAGCA ACCTCAACAG AGTGAAGCTT AA
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Protein sequence | MSEAGYNYRI VRGFAFSALF WLIIGLVVGL WIAFEMFNPA LNLTPWLSFG RLRVVHTNGL GLGFGLAGIF ATSYYILQRL TRVPLPFPRL AQAHLYLFNA AIALAAVSLF AGMNTTKEYA ELEWPLDIGV VIFWVMFAVN VFGTLIKRRE KQMYISLWYI IAMTVTIAIL YIVNNLEIPV TLFKSYSIYS GANDANVEWW YGHNIVGFIF TVPILAMFYY FLPKATGLPI YSHRLSIISF WALIFAYLWT GAHHLMLTPL PEWIQTVAIA FSIFLIAPSW GSVVNGYYTL QGNWEQMRTN YLVKFFIAGI TFYGLQTLQG PLQGLRTLNA FFHYTDWVVG HVHMGTMGWV TMIISASFYY MIPRITDTEL YSIKLANSHF WLILVGQLTW TITMWIAGIQ QGAMWKATNP DGSLMYNFLD TVTSLYPYYR LRFAAGIIYF IGILVFAWNL IMTVRQQPQQ SEA
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