| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2066 |
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| Symbol | |
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| ID | 6462819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2156424 |
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| End bp | 2157275 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728260 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002018890 |
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| Protein GI | 194337096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAT CAACAAAAAT TCTCGGTCTT ATCGGCCGTG CCGTTGATTA TTCCTACTCT
CCGCTTATCC ATAATACGGC ATGTCGGCTG CTTGGGCTTT CATACCATTA TACGGTTTTT
AACATTGCGG ATCCCTCCAT GATCCCTGAT GCCCTTCGCG GGGCAAAAGC ACTCGGGATT
GCAGGATTCA ATGTCACCAT ACCATACAAG AAGAGCGTTG TCCCCTTTCT TGACGCGCTC
TCCGCAGAGG CAGCTTCCAT ACAGGCGGTC AATACCATTG TCAATGAGGG AGGAAAACTC
ACCGGGCACA ACACGGATAT TGCCGGATTT GCCGCACCCC TTCTGCCATA CCGGGAGAGT
ATCCGAGGCA AAACACTCTC TATTTTCGGC GCAGGCGGAG CAGCGCTGGC TGCCATAGAG
GCATTCATCC GTTTTTTTTC TCCAAAAGAG ATTCTGCTCT TTGTCCGTAA CCCCGAAAAA
GCCTCTTTGC TGCTTGAGGA GAGTGGCCAT GACAAAAGTG CTCCTGTCAG GATTCTTTGT
TCTGATAATC CGGAAATAAT CAGGGAGTGC CGCGTTATCG TCAACGCCAC TCCAATCGGC
ACCAGAGGCA ATAACGACTC ACCTCTCCCT CTTGACCGGG AGTTGCTCCA CCCTGGCCAA
ATTGTCTATG ACATGGTTTA CAACCCTCTC GATACGCCAC TTCTTCTGGC TGCACAGAAG
GCTGGCGCTG CAACCATATC AGGTATTGAG ATGCTGATCG GCCAGGCTGA ACACTCGTTT
ACGCTCTGGA CTGGTATGCA GATGCCCGTT AAAGCGGTAA AAGAGAGCCT TCTGCAAGAA
ATTCAACAAT AA
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| Protein sequence | MTKSTKILGL IGRAVDYSYS PLIHNTACRL LGLSYHYTVF NIADPSMIPD ALRGAKALGI
AGFNVTIPYK KSVVPFLDAL SAEAASIQAV NTIVNEGGKL TGHNTDIAGF AAPLLPYRES
IRGKTLSIFG AGGAALAAIE AFIRFFSPKE ILLFVRNPEK ASLLLEESGH DKSAPVRILC
SDNPEIIREC RVIVNATPIG TRGNNDSPLP LDRELLHPGQ IVYDMVYNPL DTPLLLAAQK
AGAATISGIE MLIGQAEHSF TLWTGMQMPV KAVKESLLQE IQQ
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