Gene Ppha_2063 details

Gene Information

• Locus tag: Ppha_2063
• Symbol: uvrC
• ID: 6462822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 2153031
• End bp: 2154914
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642728257
• Product: excinuclease ABC subunit C
• Protein accession: YP_002018887
• Protein GI: 194337093
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.760061
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATCG AGGATGAACT CCCGGCCCGT ACCGATAGAA AAAAAGCTCT TGTTGAAAAG 
CTCGGCACAC TGCCTCCATC ACCAGGCGTC TACCAGTTCA GGAATTCGAG TGGCCGGGTA 
ATCTATGTTG GCAAGGCAAA AAATCTCCGC AACAGGGTTC GCTCCTATTT CAGAAATCAA 
CAGCAACTTT ACGGCAAAAC GCTGGTACTG GTCACTCATA TTGCTGATTT CGAGGTCATT 
ATCACCTCTT CTGAAGTCGA GGCGCTGATT CTTGAGAACA ATATGATCAA GGAGCTGAAA 
CCGCGCTACA ATGTGAACCT GAAGGACGAC AAAACCTACC CCTACCTGGT GATCACCAAT 
GAACCTTTCC CTCGGATCCT CATCAGTCGC CAACGAAGAA AGGATGGCTC CACCTGGTTT 
GGACCCTATA CAGAGTCCCG TCAGCTCCAC TCCATTCTTG ATCTTATCGG CTCAATTTTT 
CCGGTACGAA GCTGCAAATT CCGTCTGAGT GAGGAAAATA TTGCTACCAA AAAATACAAA 
GTCTGCCTCG ATTACCACAT CCATAAATGC AAGGGACCAT GTGAAGGGCG GCAGTCAGAG 
GAGGAGTACC TCCTGATGAT TGCTGAAATT ACCCGTCTGC TGAAAGGAAA GACCTCCACC 
ATGATACGCT CGCTCACCAG CGCCATGCAA CTCTTTGCCC GCGAGCTGAA ATTCGAGCGA 
GCAGCAGAGA TAAAAATGCA GCTTGAGAGC CTGAAACGGT ATGCCGAGCG CCAGAAGGTA 
GTTGCGGGAG ATGGGCTCGA CAGGGATGTT TTTGCTGTCG CTACCGGTGA AGAGGATGGT 
TGCGGCGTCG TCTTCAAAAT CCGGGAAGGG AAACTGCTTG GCTCGCAACG CATCTACATG 
AACAATGTCA CAGGGGAAAC CGACTCCGGG CTGCAGGCAA GAGTTATGGA AAAATATTAT 
CTCGAGACCC TTGAGCTTCT GCCTGATGAA ATTCTTCTTC AGGAATCCCT TGGCGCCGAT 
GAAGAGGAGA CCTTGAGAGC ACTCTTTTCG GAAAAAGAGA GAGAGGAGGC GCAGGAGAAA 
AAAAATATTC GCTTTTTGGT GCCGCAAATC GGCGAAAAAG CTCACCTGGT TGAGATGTGT 
CGTCAGAATG CACGGCATCA TCTTGAGGAA TATCTGATCC AGAAACAGAA ACGGGGCGAG 
GCTGCCCGAG AGCACTACGG CCTTACTGCT CTTAAGGAGC TGCTGCATCT GCCAAAACTC 
CCCCAGCGAA TCGAATGTTT TGACAATTCT CATCTTCAGG GTACCGATTA TGTCAGTTCA 
ATGATCTGTT TTGAGAAGGG CAAACCCAAA AAAGCGGATT ACCGCAAGTT TAAAATAAAC 
AGTTTTGAAG GATCAGATGA CTACGCGGCA ATGGAAGAGG TGATCAGGAG ACGTTACAGC 
GGATCGCTTT CGTCGAAACT CCCCTGGCCT GACCTTATCG TCGTCGATGG CGGAAAAGGG 
CAGGTCAATA TCGCTTTTCA AACCCTGAAT GCCCTCGGAC TCTCTATCCC GATTATCGGT 
CTGGCCAAGC GCATTGAAGA GATTTTTACC CCGCAGGCCC GAGACCCATT CAACCTGCCA 
AAAACCTCTC CCGCACTCAA ACTGCTCCAG CAAATGCGCG ATGAGGCTCA CCGTTTTGCC 
ATTACCTATC ACCGCAAACT GCGATCGGAA AGAATGTTGC AGACAGAACT CACCACCATT 
GCGGGAATTG GAGAGAAAAC AGCATTCAAA CTGCTTGAAC GGTTTGGCTC GGTTGACGCT 
GTTGCGCAGG CAACTCTGGA GGAGCTGACG GCAGCAGCAG GAGCAAAAAC AGCAACGGCT 
ATCTACCGTT TTTACCGACC ATAA 

 

Protein sequence

MDIEDELPAR TDRKKALVEK LGTLPPSPGV YQFRNSSGRV IYVGKAKNLR NRVRSYFRNQ 
QQLYGKTLVL VTHIADFEVI ITSSEVEALI LENNMIKELK PRYNVNLKDD KTYPYLVITN 
EPFPRILISR QRRKDGSTWF GPYTESRQLH SILDLIGSIF PVRSCKFRLS EENIATKKYK 
VCLDYHIHKC KGPCEGRQSE EEYLLMIAEI TRLLKGKTST MIRSLTSAMQ LFARELKFER 
AAEIKMQLES LKRYAERQKV VAGDGLDRDV FAVATGEEDG CGVVFKIREG KLLGSQRIYM 
NNVTGETDSG LQARVMEKYY LETLELLPDE ILLQESLGAD EEETLRALFS EKEREEAQEK 
KNIRFLVPQI GEKAHLVEMC RQNARHHLEE YLIQKQKRGE AAREHYGLTA LKELLHLPKL 
PQRIECFDNS HLQGTDYVSS MICFEKGKPK KADYRKFKIN SFEGSDDYAA MEEVIRRRYS 
GSLSSKLPWP DLIVVDGGKG QVNIAFQTLN ALGLSIPIIG LAKRIEEIFT PQARDPFNLP 
KTSPALKLLQ QMRDEAHRFA ITYHRKLRSE RMLQTELTTI AGIGEKTAFK LLERFGSVDA 
VAQATLEELT AAAGAKTATA IYRFYRP