Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2053 |
Symbol | |
ID | 6462836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2145696 |
End bp | 2146049 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728247 |
Product | hydrogenase nickel insertion protein HypA |
Protein accession | YP_002018877 |
Protein GI | 194337083 |
COG category | [R] General function prediction only |
COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.289479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGAAA TGAGTATTGC ACTCTCCATT GTGGATGCAG TTGTGGCAAA AGCCAGGCAA GAGGGCGGTG TCAGGATTTC GGCTATTGAC CTGCTGATCG GCAAATTGGC TGGTATTGAG CCTGAATCAC TGAAATTCTG TTTTTCAGCG GCAGCCAGGG AGACGCTTGC TGCAGAAGCG CTACTCAACA TTGAAGAGCC GGAAGGTGTT GGCGAGTGCG GGGAGTGCGG CATGAGCTTT CCCGTCAACT TTTATTATGC AGAGTGTCCC CGATGTCGTT CATTACGGGT GAAGATCGTC TCGGGTGAGG AATTTTTGAT TCAATCAATG ACCATAGAAG AGGAGGGGGA GTAA
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Protein sequence | MHEMSIALSI VDAVVAKARQ EGGVRISAID LLIGKLAGIE PESLKFCFSA AARETLAAEA LLNIEEPEGV GECGECGMSF PVNFYYAECP RCRSLRVKIV SGEEFLIQSM TIEEEGE
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