Gene Ppha_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2053 
Symbol 
ID6462836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2145696 
End bp2146049 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content50% 
IMG OID642728247 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_002018877 
Protein GI194337083 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.289479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAA TGAGTATTGC ACTCTCCATT GTGGATGCAG TTGTGGCAAA AGCCAGGCAA 
GAGGGCGGTG TCAGGATTTC GGCTATTGAC CTGCTGATCG GCAAATTGGC TGGTATTGAG
CCTGAATCAC TGAAATTCTG TTTTTCAGCG GCAGCCAGGG AGACGCTTGC TGCAGAAGCG
CTACTCAACA TTGAAGAGCC GGAAGGTGTT GGCGAGTGCG GGGAGTGCGG CATGAGCTTT
CCCGTCAACT TTTATTATGC AGAGTGTCCC CGATGTCGTT CATTACGGGT GAAGATCGTC
TCGGGTGAGG AATTTTTGAT TCAATCAATG ACCATAGAAG AGGAGGGGGA GTAA
 
Protein sequence
MHEMSIALSI VDAVVAKARQ EGGVRISAID LLIGKLAGIE PESLKFCFSA AARETLAAEA 
LLNIEEPEGV GECGECGMSF PVNFYYAECP RCRSLRVKIV SGEEFLIQSM TIEEEGE