Gene Ppha_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2041 
Symbol 
ID6462857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2134506 
End bp2136560 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content50% 
IMG OID642728236 
ProductATP-dependent protease La 
Protein accessionYP_002018866 
Protein GI194337072 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4930] Predicted ATP-dependent Lon-type protease 
TIGRFAM ID[TIGR02688] conserved hypothetical protein TIGR02688
[TIGR02653] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG TTTTAGACCA ACTGGATGAA AAGCTTCTCG AACATTTTCG AGGCTTTGTT 
GTCAAGAAAG ACCTGGTGCA GATGCTCAAA GTCGGCGAAA ATGTCCCTGT GTTCGTACTG
GAATATCTGA TTGCTAATTC ATGTTCTACG AATGACGAAG AGGCTATCAA AAAGGGGCTT
GATAATGTCA AGCGCATCCT CAGCGACCAC TATGTCAACC CCGAAGAGAG CGCCCTTATC
CATTCCAAAA TCAAAAATGA GGGCCGCTAC AAAATCATCG ACAAAATCAG CGTTGAACTT
GATACCGGCA AAGATGTCTA CTGGGCAAAA TTGCAGAACA GCAATATCAA GCACGCCAAC
ATCAGCGAAA GCCTGGTAAA CCAGCACGAA AAGATGATGC TTGGCGGTAT CTGGGCAATC
ATCGAAATGC GATACGATCC CGGCATCATG ATTGGCTCAA CCATCTATCC CTTCGTGGTG
GAAGAGATCA AACCGATTCA GCTCTCCAAT TTTGAGAACG GCCACTTTGT GCGCAACCGC
TCACACTTCA CTACGGAAGA GTGGATCGAC ATCCTTTTGC GCAGCTCAGG GATTGAACCC
TCGGCGGAAG GAATCACCCG CCGCATCAAG TTGCTCCTGA TATCGCGCCT CATTCCGCTG
GTGGAGGCGA ACTTCAATTT TCTGGAAATA GGGCCACGAT CTACAGGAAA AACCTATGTG
TTCAAGGAGC TTACCCCTTA TGCTGTTGTC ATTTCTGGCG GGCAGGGAAC CGTTGCCAAG
CTCTTTGTAC ACGGTTCCAC CGGCAAGGTT GGCGCTGTCG GGCAGTGGGA TGCTATTACC
TTTGATGAAG CAACCGACAA GCTCTTCAAG GAGCGGGATG CCATCCCGCT GATGAAAGAT
TATATGGAAT CCGGCTCCTT CTCCCGTGCA GGTGCCGGTG GCGAAATTAC AGGCAGCGCT
TCAATTGTGC TGAACGGCAA CATCAACCAG CCGATTGAAA CCGTGTTGCA GAACTCAAAC
CTCTTAAGCC CGCTTTCCCC TGAAATCAAC ACCGATACCG CCTTTCTTGA CCGTATACAC
TACTATTTGC CCGGCTGGGA AATGCCTAAG TTCGCGCCAA AGCATTTCAC TAAAAACTTC
GGCTTCAGCA CGGACTTCTT TTCGGAATGC CTCAAGTCAC AACGCAAGAT AAACCATACC
GACGTTGTCG AGGAGTTCTT CGCGCTCGGC TCTCACCTTA AGCAGCGTGA CACCAAACCT
GTGAAGAAAA CAGTTTCAGG ATTTATCAAG CTGATCCATC CTGACGGCAA ATACACACGG
GAGGAGGTGC AGGAATATTT GACCATTGCT CTCGAAATGA GGCGTCGTGT GAAGGAACAG
CTCAAACGTA TCGGAGGCAT GGAATTCTGG GACACTAACT TTTCCTACAT CGACAAAAAC
ACTCAGGAAG AAACCTTTGT CTCCCTGCCC GAAGAGCGAA GCTCTCACCT CATCGAAAAC
TCGCCCCTTC AGCCGGGCGT CTGCTACACA GCAACAAGCG ATGGAGAGAA CCTGACTCTG
GTTAGGATCG AGACCGCCGT TGTTACCGGA AGCGGAAAAC TGAACATCTC CGGCACCAAC
AGCACCACAC CAAAGGAAGA CATTAAAAAC ACCTATCAAT ACATCAAGGC CAACGAGAAA
ACCATCCTCA ACGAGCAGCA CTCCCTCAAG AACTACGATA TCTCCATTCA GGTGACATCA
CTCCTCGGCT CAACGATTGC GTCAGGGATA GGGGCCGCCG CCTACGTCGC CATCATCTCC
GCTATCTACA AAAGAAACCT CAAGCCAGCC CTGTCGATTC TGGGGAACAT CTCCATCGGC
GGCGCCATCG AGCGGGCAAT GAACTTCTCT GACAAAGTAT CAATGCTCTC CGAAAATGGA
GCCAAGCTCG TGCTGGTACC CATGAGCAAC CTCAACGAGT TGCAGGATCT GCCGCCTTCT
GTGCTCGGGG CTACCGATGT GCCCTTTTAT GGCAATAACC AGATGCTTAT GCAAAAGGTG
ATTTTGGGGG AATAG
 
Protein sequence
MSIVLDQLDE KLLEHFRGFV VKKDLVQMLK VGENVPVFVL EYLIANSCST NDEEAIKKGL 
DNVKRILSDH YVNPEESALI HSKIKNEGRY KIIDKISVEL DTGKDVYWAK LQNSNIKHAN
ISESLVNQHE KMMLGGIWAI IEMRYDPGIM IGSTIYPFVV EEIKPIQLSN FENGHFVRNR
SHFTTEEWID ILLRSSGIEP SAEGITRRIK LLLISRLIPL VEANFNFLEI GPRSTGKTYV
FKELTPYAVV ISGGQGTVAK LFVHGSTGKV GAVGQWDAIT FDEATDKLFK ERDAIPLMKD
YMESGSFSRA GAGGEITGSA SIVLNGNINQ PIETVLQNSN LLSPLSPEIN TDTAFLDRIH
YYLPGWEMPK FAPKHFTKNF GFSTDFFSEC LKSQRKINHT DVVEEFFALG SHLKQRDTKP
VKKTVSGFIK LIHPDGKYTR EEVQEYLTIA LEMRRRVKEQ LKRIGGMEFW DTNFSYIDKN
TQEETFVSLP EERSSHLIEN SPLQPGVCYT ATSDGENLTL VRIETAVVTG SGKLNISGTN
STTPKEDIKN TYQYIKANEK TILNEQHSLK NYDISIQVTS LLGSTIASGI GAAAYVAIIS
AIYKRNLKPA LSILGNISIG GAIERAMNFS DKVSMLSENG AKLVLVPMSN LNELQDLPPS
VLGATDVPFY GNNQMLMQKV ILGE