| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2041 |
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| Symbol | |
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| ID | 6462857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2134506 |
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| End bp | 2136560 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728236 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_002018866 |
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| Protein GI | 194337072 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
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| TIGRFAM ID | [TIGR02653] conserved hypothetical protein
[TIGR02688] conserved hypothetical protein TIGR02688 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCG TTTTAGACCA ACTGGATGAA AAGCTTCTCG AACATTTTCG AGGCTTTGTT
GTCAAGAAAG ACCTGGTGCA GATGCTCAAA GTCGGCGAAA ATGTCCCTGT GTTCGTACTG
GAATATCTGA TTGCTAATTC ATGTTCTACG AATGACGAAG AGGCTATCAA AAAGGGGCTT
GATAATGTCA AGCGCATCCT CAGCGACCAC TATGTCAACC CCGAAGAGAG CGCCCTTATC
CATTCCAAAA TCAAAAATGA GGGCCGCTAC AAAATCATCG ACAAAATCAG CGTTGAACTT
GATACCGGCA AAGATGTCTA CTGGGCAAAA TTGCAGAACA GCAATATCAA GCACGCCAAC
ATCAGCGAAA GCCTGGTAAA CCAGCACGAA AAGATGATGC TTGGCGGTAT CTGGGCAATC
ATCGAAATGC GATACGATCC CGGCATCATG ATTGGCTCAA CCATCTATCC CTTCGTGGTG
GAAGAGATCA AACCGATTCA GCTCTCCAAT TTTGAGAACG GCCACTTTGT GCGCAACCGC
TCACACTTCA CTACGGAAGA GTGGATCGAC ATCCTTTTGC GCAGCTCAGG GATTGAACCC
TCGGCGGAAG GAATCACCCG CCGCATCAAG TTGCTCCTGA TATCGCGCCT CATTCCGCTG
GTGGAGGCGA ACTTCAATTT TCTGGAAATA GGGCCACGAT CTACAGGAAA AACCTATGTG
TTCAAGGAGC TTACCCCTTA TGCTGTTGTC ATTTCTGGCG GGCAGGGAAC CGTTGCCAAG
CTCTTTGTAC ACGGTTCCAC CGGCAAGGTT GGCGCTGTCG GGCAGTGGGA TGCTATTACC
TTTGATGAAG CAACCGACAA GCTCTTCAAG GAGCGGGATG CCATCCCGCT GATGAAAGAT
TATATGGAAT CCGGCTCCTT CTCCCGTGCA GGTGCCGGTG GCGAAATTAC AGGCAGCGCT
TCAATTGTGC TGAACGGCAA CATCAACCAG CCGATTGAAA CCGTGTTGCA GAACTCAAAC
CTCTTAAGCC CGCTTTCCCC TGAAATCAAC ACCGATACCG CCTTTCTTGA CCGTATACAC
TACTATTTGC CCGGCTGGGA AATGCCTAAG TTCGCGCCAA AGCATTTCAC TAAAAACTTC
GGCTTCAGCA CGGACTTCTT TTCGGAATGC CTCAAGTCAC AACGCAAGAT AAACCATACC
GACGTTGTCG AGGAGTTCTT CGCGCTCGGC TCTCACCTTA AGCAGCGTGA CACCAAACCT
GTGAAGAAAA CAGTTTCAGG ATTTATCAAG CTGATCCATC CTGACGGCAA ATACACACGG
GAGGAGGTGC AGGAATATTT GACCATTGCT CTCGAAATGA GGCGTCGTGT GAAGGAACAG
CTCAAACGTA TCGGAGGCAT GGAATTCTGG GACACTAACT TTTCCTACAT CGACAAAAAC
ACTCAGGAAG AAACCTTTGT CTCCCTGCCC GAAGAGCGAA GCTCTCACCT CATCGAAAAC
TCGCCCCTTC AGCCGGGCGT CTGCTACACA GCAACAAGCG ATGGAGAGAA CCTGACTCTG
GTTAGGATCG AGACCGCCGT TGTTACCGGA AGCGGAAAAC TGAACATCTC CGGCACCAAC
AGCACCACAC CAAAGGAAGA CATTAAAAAC ACCTATCAAT ACATCAAGGC CAACGAGAAA
ACCATCCTCA ACGAGCAGCA CTCCCTCAAG AACTACGATA TCTCCATTCA GGTGACATCA
CTCCTCGGCT CAACGATTGC GTCAGGGATA GGGGCCGCCG CCTACGTCGC CATCATCTCC
GCTATCTACA AAAGAAACCT CAAGCCAGCC CTGTCGATTC TGGGGAACAT CTCCATCGGC
GGCGCCATCG AGCGGGCAAT GAACTTCTCT GACAAAGTAT CAATGCTCTC CGAAAATGGA
GCCAAGCTCG TGCTGGTACC CATGAGCAAC CTCAACGAGT TGCAGGATCT GCCGCCTTCT
GTGCTCGGGG CTACCGATGT GCCCTTTTAT GGCAATAACC AGATGCTTAT GCAAAAGGTG
ATTTTGGGGG AATAG
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| Protein sequence | MSIVLDQLDE KLLEHFRGFV VKKDLVQMLK VGENVPVFVL EYLIANSCST NDEEAIKKGL
DNVKRILSDH YVNPEESALI HSKIKNEGRY KIIDKISVEL DTGKDVYWAK LQNSNIKHAN
ISESLVNQHE KMMLGGIWAI IEMRYDPGIM IGSTIYPFVV EEIKPIQLSN FENGHFVRNR
SHFTTEEWID ILLRSSGIEP SAEGITRRIK LLLISRLIPL VEANFNFLEI GPRSTGKTYV
FKELTPYAVV ISGGQGTVAK LFVHGSTGKV GAVGQWDAIT FDEATDKLFK ERDAIPLMKD
YMESGSFSRA GAGGEITGSA SIVLNGNINQ PIETVLQNSN LLSPLSPEIN TDTAFLDRIH
YYLPGWEMPK FAPKHFTKNF GFSTDFFSEC LKSQRKINHT DVVEEFFALG SHLKQRDTKP
VKKTVSGFIK LIHPDGKYTR EEVQEYLTIA LEMRRRVKEQ LKRIGGMEFW DTNFSYIDKN
TQEETFVSLP EERSSHLIEN SPLQPGVCYT ATSDGENLTL VRIETAVVTG SGKLNISGTN
STTPKEDIKN TYQYIKANEK TILNEQHSLK NYDISIQVTS LLGSTIASGI GAAAYVAIIS
AIYKRNLKPA LSILGNISIG GAIERAMNFS DKVSMLSENG AKLVLVPMSN LNELQDLPPS
VLGATDVPFY GNNQMLMQKV ILGE
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