Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2015 |
Symbol | |
ID | 6462935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2106539 |
End bp | 2107402 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642728213 |
Product | inner-membrane translocator |
Protein accession | YP_002018843 |
Protein GI | 194337049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.60727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATATA TTTTACACCT TCTAATTATT GTTTCTATTT ACGTTATGCT ATCTCAAAGC TTAAGTCTTA CAGCTGGCTT TGCTGGTATG ATTTCTTTGG CTCATGCAGG ATTTTATGGC ATTGGGGCTT ATACAACTGC ATTATTATCA ATCAATTATC AGATGCCATT CATTTACACT CTTTTTTTTG GGATCCTTAT TTGTGGGATA ATAGCAATGC TAGTTTCAAT AATTGCACTA AGAACTATTG ACGATTATTT TATTATTTGT ACATTAGGGA TACAAATTGT CATTTTCACA ATTTTAAATA ATTGGATGAG TTTAACAAAT GGCCCAATGG GCATAATGGG CATCCCCTCA ATTTCTGTTT TTCAAATTGA TTTTAGTAAT AAATTATCAT TTTTAATTTT AAGTATTATT TTTTCAGTAG TTATCTTCAT TTTTATCAAG TTAATTGTTA AGTCAAGTTT TGGTAGAGTA TTAAAAGCAT TGAGCGAAGA TGAAATATAT ACTCAATCAG TAGGAAAGAA TGTCTATTTA TCTAAAGTAA TTGCGTTCAC TATAAGTTCA ATGATTGCAG CTATTCCTGG CGCATTGTAC GCACATTACA CATCGTTTGT TGATCCGTCA AGCTTTACAG TTAATGAGTC CATATTTATT TTATCAATTG TCATTATTGG AGGGATGCGT AACCTTTGGG GGATTATATT TGCTGCTGCA TTTTTGGTAT TATTGCCTGA AGCACTTCGT TTTGTTGGGT TGCCAAATAA TATTGCAGCA AATCTTAGAC AGATAATTTA TGGTATTATT TTGATTTTAG TAATTTTTAA ATCAACTACC CCGCAGCAGA GCTACGGGGT ATAA
|
Protein sequence | MEYILHLLII VSIYVMLSQS LSLTAGFAGM ISLAHAGFYG IGAYTTALLS INYQMPFIYT LFFGILICGI IAMLVSIIAL RTIDDYFIIC TLGIQIVIFT ILNNWMSLTN GPMGIMGIPS ISVFQIDFSN KLSFLILSII FSVVIFIFIK LIVKSSFGRV LKALSEDEIY TQSVGKNVYL SKVIAFTISS MIAAIPGALY AHYTSFVDPS SFTVNESIFI LSIVIIGGMR NLWGIIFAAA FLVLLPEALR FVGLPNNIAA NLRQIIYGII LILVIFKSTT PQQSYGV
|
| |