| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2008 |
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| Symbol | |
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| ID | 6462952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2096003 |
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| End bp | 2098195 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728207 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002018837 |
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| Protein GI | 194337043 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.196869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGA GCCGCTTCAC CGAGGAGCTG GATTTGCTTG CAAAGGCTTT GCGCCAGCAT
TCATTTCACT TTATCATCAT CGGCTACAAC CATCCCGACG TTTACCGTGA CGTGTCGGAG
TGGCTCCGTG TTCATCTGCC GGGGCGAGCG ATACAGGAGT TGACGGTATC AGGCAAGAGT
TACCGGGAGA TCACCGGAGA ACTTGAAGAT GCCGGTCAGA ACATTGTCAT GATACCGGAC
TTTGATTGGC TGTTCAACCC TGAAAATGAA CCAGTTTGTG TAGCGCTCAA CCAGCGTCGT
GATTATTTGG TACGTCGGGA GCTGAATCTC CTCTGCTTTA TTCAAGCCAG CAAGTTCAAA
CTGCTTCCGG TCAAAATCCC CGATCTCTGG TCACTCCGCT CACTGGAGCT TGATTTTGCC
TATGCACTCA AAGAGGAGAA ATTCCCGATT GCAGGTAAAG CCAATATCGA CTCCTCTTTG
GGAGGAAGCA CTATCCCGGA AAAAGAGGCT GAGGTGAGAA GGCTGAAATA TCAAATCAGC
AAGAGTGACA AGAGCAATAC CGCACTGTTG CAGGCGCTCA AATCACAGTT GGCTACACTG
CAAATCGAGC TGCCGCCACG ACAAGAGAGT GAAGCATTTG AAAAAGATGA ACCCTCCGTA
GTTCAGAAAA CCGGCAGGAT CAAAATATTG CCGGAATTTT TAGATGTCAG CCTTGATCTC
GGTAGGGAGA GTCCGGAAAA GATCCTTGCT GCCATGAAAG AGCTTGAAGA GGAGGAAAAA
GCGATGCTCT CGGTATTTGC GCTCCTTCCG GCTGAACCGG TTACCTATAC AACACTTGAT
GAGCTGCTGC CAGGAACAGA GAACCTCGAA AAAATCCTGC TCAAACTTGC ACAGCAAGGG
TTGATTGCAT ACCACAAAAA GGATGCAAGT TTCACATGCA GCCCTGTTGT GCAGGAGGTG
TCCCGACGCC AGAACAGGGA AAAACTTTTT GAGCATGGTA AACTGCTGAT TGCGACCCTC
ATCGAGAAGC TTGATTATGA ACCTGGCATC GGCCATTTTT TAAACGCCAC CTACAGTGAG
GCTGCCCTCT TTGCGCACTA TGCCGAGAGT AACCTGCGAA CAATCAGCAA GGCAGATAAC
CAGTTAGCCA TCCTTGCCGA GCGCATCGGC AACTTCCATA AAACAACAGG CAATATCGAC
AAGGCCCTGA TCTTTTTTGA AGAATATTTC CGGTTACGCA AAGAACTCTA TGAGGCTGAT
CCTCAAAATG TCGAATTCAA AAACGGGCTC GCTATTTCGT ACTCTAAACT CGGCAATACC
CACTCCGCTC TCGGCAATCT CGACAAGGCC TTGACCTTTT ATGAACAAGA CGCCCAATTA
AGTAAAGAAA TCTACGAGGT TTATCCTCAA AATGTCGAAT TCAAAAACGG GCTCGCTATC
TCTTACGAAA AACTCGGTGA AACGCACTCA GCTCTCGGCA ATCTCGACAA GGCCTTGACC
TTTTATGAAC AAGACGCCCA ATTAAGTAAA GAACTCTACG AGGTTTATCC TCAAAATGTC
GAATTCAAAA ACGGGCTCGC TATCTCTTAC GAAAAACTCG GTGTAACTCA CTCCGCTCTC
GGCAATCTCG ACAAGGCCTT GACCTTTTAT GAAGATTTTT CCCGATTAGA GAAAGAACTC
TTTGAGGCTT ATCCCCAGAA TGTATCCTTC AAAAACGGAC TCGCAATTTC TTACGAAAAA
CTCGGAGGGA CTCACTCCGC TCTCGGCAAT ATCGACAAGG CCTTGACCTT TTTTAATGAT
GAAACCCGAT TATTTGAAAA ACTCTATGAA GCTTATCCTC AAAATGTCTC CTTCAAAAAC
AACCTCGCCA TCTCTTACGA AAAACTCGGA GAGACTCACT CCTCTCTCGG CAATCTCGAC
AAGGCCTTAA CCTTTTTTGA ACAGGATGCC CAATTAACTA AAGAACTCTA TGAGGATTAT
CCCCAAAATG TATCCTTCAA AAACGGGCTC GCCATTTCAT ACGCGAACCT TGGGTTGTTC
CACCGTGATA AACGGAGTGA CAACGCAACA GCACGCACCC TTTTTGAGCA GGCAAAGACC
TTGTGGGCTC AATTGGTGGC GGATTCTCCC TCAAACGCCG AATTTCAGAA AAACTTGTCA
CAGGTTAATG ACGTTTTGGA GAAAATGCAA TAA
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| Protein sequence | MNESRFTEEL DLLAKALRQH SFHFIIIGYN HPDVYRDVSE WLRVHLPGRA IQELTVSGKS
YREITGELED AGQNIVMIPD FDWLFNPENE PVCVALNQRR DYLVRRELNL LCFIQASKFK
LLPVKIPDLW SLRSLELDFA YALKEEKFPI AGKANIDSSL GGSTIPEKEA EVRRLKYQIS
KSDKSNTALL QALKSQLATL QIELPPRQES EAFEKDEPSV VQKTGRIKIL PEFLDVSLDL
GRESPEKILA AMKELEEEEK AMLSVFALLP AEPVTYTTLD ELLPGTENLE KILLKLAQQG
LIAYHKKDAS FTCSPVVQEV SRRQNREKLF EHGKLLIATL IEKLDYEPGI GHFLNATYSE
AALFAHYAES NLRTISKADN QLAILAERIG NFHKTTGNID KALIFFEEYF RLRKELYEAD
PQNVEFKNGL AISYSKLGNT HSALGNLDKA LTFYEQDAQL SKEIYEVYPQ NVEFKNGLAI
SYEKLGETHS ALGNLDKALT FYEQDAQLSK ELYEVYPQNV EFKNGLAISY EKLGVTHSAL
GNLDKALTFY EDFSRLEKEL FEAYPQNVSF KNGLAISYEK LGGTHSALGN IDKALTFFND
ETRLFEKLYE AYPQNVSFKN NLAISYEKLG ETHSSLGNLD KALTFFEQDA QLTKELYEDY
PQNVSFKNGL AISYANLGLF HRDKRSDNAT ARTLFEQAKT LWAQLVADSP SNAEFQKNLS
QVNDVLEKMQ
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