Gene Ppha_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1941 
Symbol 
ID6463136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2027361 
End bp2028227 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID642728145 
Producthypothetical protein 
Protein accessionYP_002018775 
Protein GI194336981 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000016272 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCAAAA TAAATCCTCG CGTCGATTTC GCCTTTAAAA AGCTTTTTGG CAGTGAAGAG 
AACAAAGATC TGCTCATCTC CCTCATTAAC GCCATCGTCT CCGAAGAGGA TCAGGTGGTG
GAGATTGAGC TGAAAAACCC GTACAATCTG GCGGATTACC GTGCAGGAAA AATCTCTATT
CTCGACATCA AGGCTAAAGC TGAAAATGGC CGCTGGTTCA ACGTTGAGAT GCAGATAAGT
GAAGACTACA ACTTCGACAA ACGGGCTATT TTCTACTGGG CCAAGCTGGT CACCGAACAG
CTCAGCGAAG GGATGATGTA CAAAGAGCTG AAGAAAACTA TCAGTATCAA CATTCTCGAC
TATAACTTTG TTCCTGATAC AACGGATGTT CACAGTTGCT ACAAAATCAT CAATACCGCC
ACAGGAAAGG ATGACCGGCT GCACGACGTT TTTGAACTGC ACTACATTGA GCTGAAAAAG
TTCAATAAAC TGCACCATGA AATTAGCAGT ACACTTGATC GCTGGACGAC CTTTTTAACG
ACAGCGCATC AGCTTGACCG GGAGCATACA CCCAAAGAGC TTGCCGTCGA CAAAAATATT
GTGAAAGCCA TTGCGGCCAT AGATCGCATG TTTAATGAAG AGGAACGTCA GGTTTATGAG
GTGCGCAAGC AATCATTGGT GGACGCAGAA AGCAAAATTG CATCGGCACT GGAAAAGGGC
ATGGAAAAGG GCATGGAAAA AGCATCGAAA GCCATTGCAC TCAACTTGTT GGGCAAAGGC
ATTGCTATTG CCACCATTGC CGAGGCCACA GGGTTGAGTG TGTCGGAAAT CACCTCTTTA
TCGCAGCATA CGAGTGGCGA ACAATAA
 
Protein sequence
MCKINPRVDF AFKKLFGSEE NKDLLISLIN AIVSEEDQVV EIELKNPYNL ADYRAGKISI 
LDIKAKAENG RWFNVEMQIS EDYNFDKRAI FYWAKLVTEQ LSEGMMYKEL KKTISINILD
YNFVPDTTDV HSCYKIINTA TGKDDRLHDV FELHYIELKK FNKLHHEISS TLDRWTTFLT
TAHQLDREHT PKELAVDKNI VKAIAAIDRM FNEEERQVYE VRKQSLVDAE SKIASALEKG
MEKGMEKASK AIALNLLGKG IAIATIAEAT GLSVSEITSL SQHTSGEQ