Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1891 |
Symbol | |
ID | 6463263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1979412 |
End bp | 1979945 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728102 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_002018734 |
Protein GI | 194336940 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.351382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAAG AAACGAAGAG CGGATGTTGC TGCCCGGGTG TGGAAGGAAA TGAAGGTTCA GCAACTGAAA AGCGACTTGG CTGGCAGGAA TATTTTATGA GCGTTGCCCA TCTTATTTCA CGCAGGGCGA CTTGTACCAG GGGTCATATC GGTGCGGTCA TCGTCAGGGA GAACAGTATT CTTTCGACCG GGTACAACGG AGCGCCATCC GGACTTCCTC ACTGTAACGA AAGCAATTGC CGTATCTACC GCAGCATTCA TCCTGATGGG ACTGTCGAGG AGAACTGTGT TAACACCATC CATGCTGAAA TCAATGCCAT TGCCCAGGCT GCAAAGCATG GCGTATCGAT CAAGGATTCC GATATCTACA TTACGGCCAG TCCCTGTATC CACTGTTTGA AAGTGCTCAT AAATGTGGGT ATAAAGACCA TCTACTATGA TAAACCCTAT AAAATAGAGC ATATCGCTGA ATTGCTCAGG CTTTCCGGCA TCCGGCTGGT GCAGGTCAAC GTGCAGAGTG ACCAGAGGGG GTGA
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Protein sequence | MPEETKSGCC CPGVEGNEGS ATEKRLGWQE YFMSVAHLIS RRATCTRGHI GAVIVRENSI LSTGYNGAPS GLPHCNESNC RIYRSIHPDG TVEENCVNTI HAEINAIAQA AKHGVSIKDS DIYITASPCI HCLKVLINVG IKTIYYDKPY KIEHIAELLR LSGIRLVQVN VQSDQRG
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