Gene Ppha_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1891 
Symbol 
ID6463263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1979412 
End bp1979945 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content50% 
IMG OID642728102 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002018734 
Protein GI194336940 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.351382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGAAG AAACGAAGAG CGGATGTTGC TGCCCGGGTG TGGAAGGAAA TGAAGGTTCA 
GCAACTGAAA AGCGACTTGG CTGGCAGGAA TATTTTATGA GCGTTGCCCA TCTTATTTCA
CGCAGGGCGA CTTGTACCAG GGGTCATATC GGTGCGGTCA TCGTCAGGGA GAACAGTATT
CTTTCGACCG GGTACAACGG AGCGCCATCC GGACTTCCTC ACTGTAACGA AAGCAATTGC
CGTATCTACC GCAGCATTCA TCCTGATGGG ACTGTCGAGG AGAACTGTGT TAACACCATC
CATGCTGAAA TCAATGCCAT TGCCCAGGCT GCAAAGCATG GCGTATCGAT CAAGGATTCC
GATATCTACA TTACGGCCAG TCCCTGTATC CACTGTTTGA AAGTGCTCAT AAATGTGGGT
ATAAAGACCA TCTACTATGA TAAACCCTAT AAAATAGAGC ATATCGCTGA ATTGCTCAGG
CTTTCCGGCA TCCGGCTGGT GCAGGTCAAC GTGCAGAGTG ACCAGAGGGG GTGA
 
Protein sequence
MPEETKSGCC CPGVEGNEGS ATEKRLGWQE YFMSVAHLIS RRATCTRGHI GAVIVRENSI 
LSTGYNGAPS GLPHCNESNC RIYRSIHPDG TVEENCVNTI HAEINAIAQA AKHGVSIKDS
DIYITASPCI HCLKVLINVG IKTIYYDKPY KIEHIAELLR LSGIRLVQVN VQSDQRG