Gene Ppha_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1873 
Symbol 
ID6463322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1963463 
End bp1963894 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID642728082 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_002018716 
Protein GI194336922 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGA CCCTGAGTAA TTTTGGCAAT GTCTTTGCCT TCCTCGCCCT CGGAGTTGTC 
TTTGTAGCCG GTGGTTATCT GACAGCTCGA ATGCTGCGCC CAAGCAGACC GAATCCAGCC
AAAAACTCAA CCTATGAGTG TGGCGAAGAG GCTGTAGGCA GTGCCTGGGT AAAGTTCAAT
ATCCGGTTTT ATGTTGTAGC TCTTATCTTC ATCATTTTTG ATGTTGAGGT TGTGTTTCTT
TACCCTTGGG CGACCGTGTT CAAGCAACTT GGCGAATTTG CGCTGATTGA GGCTCTTGTT
TTTGCCGGTA TCCTTGTGCT TGGTCTTGCT TATGCCTGGG TAAAGGGGGA TCTGGATTGG
GTAAGGCCTA CTCCAAATAT TCCGAAAATG CCTGAAATGC CGTCAGGAAA GTCAGGCGCT
CTCAGGGGTT AA
 
Protein sequence
MDQTLSNFGN VFAFLALGVV FVAGGYLTAR MLRPSRPNPA KNSTYECGEE AVGSAWVKFN 
IRFYVVALIF IIFDVEVVFL YPWATVFKQL GEFALIEALV FAGILVLGLA YAWVKGDLDW
VRPTPNIPKM PEMPSGKSGA LRG