| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1865 |
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| Symbol | |
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| ID | 6463339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1956092 |
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| End bp | 1958368 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728074 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_002018708 |
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| Protein GI | 194336914 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.13806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGTT TAATTCAGTT ATCAATAGTC GTACTGCTGC TGCCGCTGCT CTCGTTTGTC
ATTCTTATCT TTTTTAATCG TCGTCTTCCC AGAAACGGTG ATTTTCTTGG AGTTGGAATA
CTTGGCACAG CATTTGGCAT CTCTGCCTAT ATCTTCTGGT CGGTCATTGT GCAGGCCTAC
GATCCGGCAT TCAGGATTGC CTGGGATTTT ACCTGGATTG ATTTGGGCAA TGTACCGGGG
GTAGGCCCGC TGCAGATCAA GATGGGCGTT GTTATCGACA ACCTCACGGC CATTATGCTC
ACAATGGTAA CGCTTATCAG CCTGCTTGTT CACCTGTATT CAACCGGATA TATGGCCGGG
GACAAGAATT ATGGAAGGTA TTTTGCCTAT CTGGGGATCT TTACCTTCTC CATGCTTGGC
ATCGTACTCT CTGATAATCT GTTCGCTATC TATATTTTCT GGGAACTCGT CGGTCTCTCT
TCCTATCTTC TTATCGGATT CTTCTTTGAA AAGGATAGTG CGGCTGATGC ACAGAAAAAG
GCATTTCTTG CCAACCGTGT CGGCGACATC GGTATGTGGC TTGGTATTCT GATTCTCTAT
TCCCAGTTCC ACACCTTCAG CTTCGAGCAG ATCTATGCCA ATCTTGCAGC AGGAAAGTTT
GCTCTCTCCA ATGCTTGGTT AACGGCTGCG GGTATCCTTC TCTTTATGGG CTGCGTAGGC
AAGTCGGCTC AGTTCCCGCT TCATGTATGG CTTCCTGATG CCATGGAGGG CCCGACACCG
GTATCGGCCC TGATCCATGC GGCTACTATG GTTGCCGCAG GCGTTTACTT TGTTGCCCGC
ATCTTTGTGA TGCTGACACC TGACGCACTG CATGTTATCG CCTTTATCGG TGCCATGACA
GCCTTCATGG CAGCAACCAT AGCAATTACC CAGCATGACA TCAAAAGGGT TCTTGCCTAT
TCGACGGTCT CGCAGCTTGG ATACATGGTT CTTGGTCTTG GTGTTGGCGC CTACTCGGCA
TCACTCTTTC ACCTTGTTAC GCACGCATTT TTTAAAGCCT GTCTTTTTCT TGGTTCAGGC
GCCATTATCC ATGCCATGCA CCATGAACAG GACATGCGCT GGATGGGCGG TCTTCGCAAA
CAGATGCCAT GGACCTTTGC AACCTTTACC CTTGCAACGC TTGCCCTTGC CGGTTTGCCT
CTTACCAGCG GTTTTCTGAG CAAAGATGCT ATTCTTGCAG GCGCTCTCGG TTTTGCTGAG
GTAGAGGGTG GCGGTATTTA TTATCTCATT CCTGCTCTTG GATTCTTTTC TGCCATGCTT
ACCGCTTTCT ATATGGGGCG TCAGATATGG CTTGTCTTCT TCGGTGAAAG TCGCACGCAC
CTGAAACCAG CCGACAATCA TCATCAGGCT CATCATGCAC ATGCCAGTCA TGATGCGCAT
ACCGACGATC ATCATGCTGC TCATGGAGTA CATGAGGTTT CATGGAACAT GCGGGCGCCA
CTTGTTGTTC TGGCGACACT TTCCGTATTT TTTGTCTATT CCCCGGATCC CCTTGATGGC
GCAAAAGGGT GGTTTATGAA GATGATTCCG ACCCCGGCAA CGGTTGTGGG TGCCGCCAAT
CCACAGATAG GTGCCCATCC TGCAGGTACG GTTGCACCGC ATCTTGCGGG AGTTGTTCCG
GCTGCTGAAG TCGCTCTTCC TGAACATGGA GCTGCTCATG GTGTTGCCGA ACATGGTGTT
GCTTCAGTTG GACATGGCGG ACAAGTCTAC TCGGATCCGC GCCAGGCAGA AATCGTTCAT
GCCGGACATG CTGCGCACTA CACCGCAATC TATATTTCCA CCCTGATGGT TGCGCTCGGT
ATTGGCATGG CATTTGTTGT TTACGTCTTC AGGATTATTG ATCCTGATAA AACAGCCCAA
TCCATCAGGC CACTTTACCT CTTTTCGCTT AACAAGTGGT ACTGGGATGA GATCTATGAT
GCTACGGTTA TCAAGGGGTC AATGGTTATT GCTAAAATGC TCTCCTGGTT CGACACCAAT
GTTGTTGATG GAATAGTCAA TGGCGTTGCT TTTCTGGTCA GAAAATTCGC TTTCCTTAAT
GACGGATTTG ACAGAAACGT GGTTGATGGC CTCGTGAATT TTACAGCTTT CACCGTCAAT
ACAACGGGCG CTGTATTGAG AAAGTTTCAG ACCGGCAAGG TGCAAACCTA TGTTGTGATG
TTGCTTCTTG TGCTTGCTGG TTACTTTGTT TTTTATTTTA CACGACTGAT CTACTAA
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| Protein sequence | MHSLIQLSIV VLLLPLLSFV ILIFFNRRLP RNGDFLGVGI LGTAFGISAY IFWSVIVQAY
DPAFRIAWDF TWIDLGNVPG VGPLQIKMGV VIDNLTAIML TMVTLISLLV HLYSTGYMAG
DKNYGRYFAY LGIFTFSMLG IVLSDNLFAI YIFWELVGLS SYLLIGFFFE KDSAADAQKK
AFLANRVGDI GMWLGILILY SQFHTFSFEQ IYANLAAGKF ALSNAWLTAA GILLFMGCVG
KSAQFPLHVW LPDAMEGPTP VSALIHAATM VAAGVYFVAR IFVMLTPDAL HVIAFIGAMT
AFMAATIAIT QHDIKRVLAY STVSQLGYMV LGLGVGAYSA SLFHLVTHAF FKACLFLGSG
AIIHAMHHEQ DMRWMGGLRK QMPWTFATFT LATLALAGLP LTSGFLSKDA ILAGALGFAE
VEGGGIYYLI PALGFFSAML TAFYMGRQIW LVFFGESRTH LKPADNHHQA HHAHASHDAH
TDDHHAAHGV HEVSWNMRAP LVVLATLSVF FVYSPDPLDG AKGWFMKMIP TPATVVGAAN
PQIGAHPAGT VAPHLAGVVP AAEVALPEHG AAHGVAEHGV ASVGHGGQVY SDPRQAEIVH
AGHAAHYTAI YISTLMVALG IGMAFVVYVF RIIDPDKTAQ SIRPLYLFSL NKWYWDEIYD
ATVIKGSMVI AKMLSWFDTN VVDGIVNGVA FLVRKFAFLN DGFDRNVVDG LVNFTAFTVN
TTGAVLRKFQ TGKVQTYVVM LLLVLAGYFV FYFTRLIY
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