| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1860 |
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| Symbol | |
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| ID | 6463353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1949107 |
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| End bp | 1949790 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728069 |
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| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
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| Protein accession | YP_002018703 |
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| Protein GI | 194336909 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGAGAA TAATAGAAGA AATCTACGTC TGGAGGCTGC CTGTCAGGTT TTATCACTGG
ATCAATGCCC TGTGTATGGT GGTTCTTTTT GTAACGGGAA TGTATATCGC CGCCCCTTTG
CTGAGCCCTC CGCTCGGTGA AGCGGTCTGG TATAAGGGCA TGGGCTGGTG GCGTTATATG
CATTTCGTTT TTGCCTTTAT TTTTATCGCC AACTTTCTTT TCCGCCTCTA TTGGGCGCTC
TTTGGTGGTG ATAAATATGC CCGCTTTGGC GGTTTCAGGC CATGGTCGCC CTCCTGGTGG
GGCAAGCCCT TCAGGGAGCA GGTTGAGTCC TATCTCTTTC TGCGCACGGA TGAGCCGAAC
TACGTAGGTC ATAACCCCGT TGCAGCTCTG GCTCACTTTG TCTTCATTTT CTGCGGCTCG
ACCTTCATGA TTCTTTCGGG CTTGGCAATG TATGGTGAAA ACAATCCGGG AGGGTTCAAC
GAAACCTTGT TTGGCTGGAT GATTCCCCTT TTCGGCGGTA GCTACACCCT TCATTTCATA
CACCATCTTG GGGCATGGAT GTTGCCGATT TATGTCATCA TGCACCTTTA TGCGGTTATC
CGTCACGATG TGGTCGATCG TACCAGCGTT ACCTCTTCAA TCATTACCGG TTTCAAGCAC
AAGGTTGAAG AAGAACCTGT TTGA
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| Protein sequence | MGRIIEEIYV WRLPVRFYHW INALCMVVLF VTGMYIAAPL LSPPLGEAVW YKGMGWWRYM
HFVFAFIFIA NFLFRLYWAL FGGDKYARFG GFRPWSPSWW GKPFREQVES YLFLRTDEPN
YVGHNPVAAL AHFVFIFCGS TFMILSGLAM YGENNPGGFN ETLFGWMIPL FGGSYTLHFI
HHLGAWMLPI YVIMHLYAVI RHDVVDRTSV TSSIITGFKH KVEEEPV
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