Gene Ppha_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1808 
Symbol 
ID6463452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1912680 
End bp1913453 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content36% 
IMG OID642728023 
ProductGas vesicle synthesis GvpLGvpF 
Protein accessionYP_002018657 
Protein GI194336863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.580439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGG ATGGCAAGTA CGTTTATTGT ATCATTGCTT CTACTTATGA ATGCAATTTT 
GGTGCAATTG GAATAGGGGG TAGAGGTGAT CTTGTAAATA CAATTGGATT TCAGGGCTTA
AGTATGGTTG TTAGTGACCA CCCACTTAAT CATTTTGTTT TAAACCCGGA TAATATTCTT
GCTCATCAAA GAGTCATAGA GGTCGTGATG AGTCAATTCA ATAGTGTTAT TCCAGTTCGA
TTTGGCACAG TTGCAGCAAC ACCAGATGAA ATAAGAAATC TTCTTGATCG CAGGTATGGC
GAATTATCTG AACTTCTTGA GCGTTTTGAA AACAAGGTTG AGTATAATCT TAAAGCATCA
TGGCGCTGCA TGATCGATAT ATATAAAGAG ATAGATAAAG AACATGTTGA GTTAAAACAA
TTGAGACGTG AAATAGAGGG ACTGAAGGAT GAAGAAAAAA GAAAACTGCT TATTGTTGAG
GCCGGACATA TTATTGAGAA TGAGTTGCAA AAAAAGAAAG AAGTCGAAGC ATACGAAATT
GTAACATATT TGAGAAAGAC AGTTGTTGCT CATAAGCATA ATAAGACAAC TGGCGAGGCT
ATGTTTATGA ATACCGCTTT TTTATTGAAC AAAGGCCGTG AAGTAGAGTT TGATAATATA
ATGAATGATC TTGGTGAGCA ATATAAAGAC AGAAGTGACT ATTATTATAC AGGCCCTTTA
CCGATCTTTA ACTTTATAGA TTTACGAATT CTTCCTGAGA AATGGGAACT CTGA
 
Protein sequence
MEKDGKYVYC IIASTYECNF GAIGIGGRGD LVNTIGFQGL SMVVSDHPLN HFVLNPDNIL 
AHQRVIEVVM SQFNSVIPVR FGTVAATPDE IRNLLDRRYG ELSELLERFE NKVEYNLKAS
WRCMIDIYKE IDKEHVELKQ LRREIEGLKD EEKRKLLIVE AGHIIENELQ KKKEVEAYEI
VTYLRKTVVA HKHNKTTGEA MFMNTAFLLN KGREVEFDNI MNDLGEQYKD RSDYYYTGPL
PIFNFIDLRI LPEKWEL