| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1798 |
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| Symbol | |
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| ID | 6461534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1902881 |
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| End bp | 1903930 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728013 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002018647 |
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| Protein GI | 194336853 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC AGCCACAAAA AAACGAATCG GAACAACGAG GTGAACCACC TCTTGAGCCC
AAAAAACTCA CCTTGCAGGT AAGTCGGGTA CAAATCCCGA TGCGTATTGA CCAATACCTG
ACACAGCAGG TTGAAAACGC AACACGCAAC AAGGTACAGG AAGCTATTGA AGAGGGTCGT
GTGCTGGTCA ATGAAAATAG GGTAAAATCG AATTATCGCA TTAAATCATG CGATGTTATT
GAGATGACTT TTCTGCGGCC ACCAGCACCG GAGCTCACAG CGGAAAATAT ACCCATTGAG
ATCATATACG AGGATTGTGA TCTGATGGTC GTCAACAAAA AAGCTGGTAT GGTAGTCCAT
CCTGCATTCG GGAACTGGAC AGGAACACTG GCAAACGCTA TTCTGCACCA CATTGGCATG
GATGCAGAGG AGCTTGACCA AGCTGAGCTA CGACCAGGAA TCGTACATCG GCTCGACAAA
AACACCTCGG GACTTATCAT TGTTGCCAAA AATCCGATTG CGCTGCATCG TCTTGCCCGC
CAGTTCGCTG AGAGAAAAGT GATAAAAGTC TACAAGGCCA TCGTATGGGG AGTTCCCGAT
CCAGCAGCAG GCACCATAAC AACCAATATC GGACGCTCAA AAAAAGACCG AAAAGTGATG
GCAAACTTTC CTTTTGAAGG AGAGTATGGA AAAACTGCGA TCACCGATTA TTCCGTAATG
GAAAATCTCC AATGGTTTTC GCTGCTTTCG CTTAGGCTGC ATACAGGACG AACCCACCAG
ATCAGGGCTC ACTTGCAGCA CCTTGGTCAT CAGATTCTCG GAGATGTTAC CTATGGCGGA
ACCATCTTGC GCACACTCCC TTTCAGTAAA AGTGAAAGTT TCGTTAAAAA CCTCCTCGAA
CTACTACCGC GTCAAGCTTT ACATGCCGAA ACGCTCTCTT TTCATCAGCC AATAAGCCAT
GAACCACTCT CCTTCACGGC GCCCATGCCG GAAGATATGC AGCATGCGCT GGATAAAATC
CGCTCAACAC TTCTTCATCC CTCTTGTTAA
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| Protein sequence | MQNQPQKNES EQRGEPPLEP KKLTLQVSRV QIPMRIDQYL TQQVENATRN KVQEAIEEGR
VLVNENRVKS NYRIKSCDVI EMTFLRPPAP ELTAENIPIE IIYEDCDLMV VNKKAGMVVH
PAFGNWTGTL ANAILHHIGM DAEELDQAEL RPGIVHRLDK NTSGLIIVAK NPIALHRLAR
QFAERKVIKV YKAIVWGVPD PAAGTITTNI GRSKKDRKVM ANFPFEGEYG KTAITDYSVM
ENLQWFSLLS LRLHTGRTHQ IRAHLQHLGH QILGDVTYGG TILRTLPFSK SESFVKNLLE
LLPRQALHAE TLSFHQPISH EPLSFTAPMP EDMQHALDKI RSTLLHPSC
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