Gene Ppha_1781 details

Gene Information

• Locus tag: Ppha_1781
• Symbol: greA
• ID: 6462477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 1880967
• End bp: 1881446
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 642727993
• Product: transcription elongation factor GreA
• Protein accession: YP_002018630
• Protein GI: 194336836
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.695085
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGACA GAATTTACCT GACAAGTGAT GGGTATAACC GGCTGAAAGA GGAATTATAC 
GTGCTGGTTC ATCAAACCAG AAGGGAAGTT CTGGAAAAAA TTGCTGAAGC GAGGGCTCAT 
GGTGATCTCA GCGAGAACGC AGAGTATGAT GCGGCCCGAG AAGAGCAGTC TCATACCGAA 
GCGCGTATTG CAGATCTTGA AAACAAACTG GCATCGGCAA CGATTCTTGA CCCAAAACAG 
ATCAAGACCG ACAAGGTTTA TATTCTTACT TCCGTAAAGT TGAAAAATCT TGATACTCCT 
GATGAAATCA TCGAATATAC GCTGGTATCA TCAGAAGAGG CCGACACCGA TTCAGGCAAA 
ATCTCTGTCC GATCCCCGGT AGGAAGAGCA TTGATCGGAA AAGCTGTAGG CGAAAAAGTT 
CAGATAGTCG TCCCCAAAGG TGAACTTCAC TATGAGATAT TAGAGATTTT TGTTAAATAG 

 

Protein sequence

MTDRIYLTSD GYNRLKEELY VLVHQTRREV LEKIAEARAH GDLSENAEYD AAREEQSHTE 
ARIADLENKL ASATILDPKQ IKTDKVYILT SVKLKNLDTP DEIIEYTLVS SEEADTDSGK 
ISVRSPVGRA LIGKAVGEKV QIVVPKGELH YEILEIFVK