Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1763 |
Symbol | aroK |
ID | 6462887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1862566 |
End bp | 1863360 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727975 |
Product | shikimate kinase |
Protein accession | YP_002018612 |
Protein GI | 194336818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCAACA AGCTGCAAGG TGCAGTTCTG TTCATCAAGA GAGTGGCTGC TGATGCGCAA AATCGTAAAC TTCCGGGGAA TATGGCAACG AAAAAGGGGC TCAGCAAAGG AATACTGACT TTTTTGAACG GGAGGTGCCG GATTTTTTTT ATTTTCGTAA AGCTTTGCAC GACTTGTGCG GAGCTGCAGG CAAAACAGAG AGGTTTTGAA CAATCAGTCG TGAATAAAGA ACATACCCTT ATTTTTTTAA CCGGGTTCAG TGGATCAGGA AAATCGACTA TAGGGCCGCT ACTGGCCAAT TCACTCGGTT ATGAGTTTGT TGATCTCGAT CAGAGCATTG AACAAGATAC CGGTAAAACC ATTACCCGGA TTTTTGCGGA AGAGGGTGAG GAGTTCTTTC GTGCTCTTGA ACTGCAGAGG CTGAGTGCTC TTGTCACACA AAACAACATG ATAATCTCCC TCGGCGGAGG AGCACTGGAA AATGATCTGG CATATGCACT CATTCAGAAA TCCGGCACCC TGGTTTATCT GAAATCGCCA TCCAAAACAC TTGCAAGGAG ACTCTGCAAC AAGACCGATC GCCCTTTGTT ACGAGGAGAA AAGGGACGAA AGCTTTCGCG TGAAGAGATT GAGGAGAAGA TCTCGACAAT CCTTGCCAAA CGGGAACCCC GCTATGAAAG TGCTGATATT ACCGTTGAGA CCGACATCAA ACGCATCGGT TCAACCGTTG AGGAGCTGAC CCGGAAAATA GAGCGGTTTG TGCGGAGCGC CTCCGCAACT GCCGATGACC AATAA
|
Protein sequence | MRNKLQGAVL FIKRVAADAQ NRKLPGNMAT KKGLSKGILT FLNGRCRIFF IFVKLCTTCA ELQAKQRGFE QSVVNKEHTL IFLTGFSGSG KSTIGPLLAN SLGYEFVDLD QSIEQDTGKT ITRIFAEEGE EFFRALELQR LSALVTQNNM IISLGGGALE NDLAYALIQK SGTLVYLKSP SKTLARRLCN KTDRPLLRGE KGRKLSREEI EEKISTILAK REPRYESADI TVETDIKRIG STVEELTRKI ERFVRSASAT ADDQ
|
| |