Gene Ppha_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1763 
SymbolaroK 
ID6462887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1862566 
End bp1863360 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID642727975 
Productshikimate kinase 
Protein accessionYP_002018612 
Protein GI194336818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAACA AGCTGCAAGG TGCAGTTCTG TTCATCAAGA GAGTGGCTGC TGATGCGCAA 
AATCGTAAAC TTCCGGGGAA TATGGCAACG AAAAAGGGGC TCAGCAAAGG AATACTGACT
TTTTTGAACG GGAGGTGCCG GATTTTTTTT ATTTTCGTAA AGCTTTGCAC GACTTGTGCG
GAGCTGCAGG CAAAACAGAG AGGTTTTGAA CAATCAGTCG TGAATAAAGA ACATACCCTT
ATTTTTTTAA CCGGGTTCAG TGGATCAGGA AAATCGACTA TAGGGCCGCT ACTGGCCAAT
TCACTCGGTT ATGAGTTTGT TGATCTCGAT CAGAGCATTG AACAAGATAC CGGTAAAACC
ATTACCCGGA TTTTTGCGGA AGAGGGTGAG GAGTTCTTTC GTGCTCTTGA ACTGCAGAGG
CTGAGTGCTC TTGTCACACA AAACAACATG ATAATCTCCC TCGGCGGAGG AGCACTGGAA
AATGATCTGG CATATGCACT CATTCAGAAA TCCGGCACCC TGGTTTATCT GAAATCGCCA
TCCAAAACAC TTGCAAGGAG ACTCTGCAAC AAGACCGATC GCCCTTTGTT ACGAGGAGAA
AAGGGACGAA AGCTTTCGCG TGAAGAGATT GAGGAGAAGA TCTCGACAAT CCTTGCCAAA
CGGGAACCCC GCTATGAAAG TGCTGATATT ACCGTTGAGA CCGACATCAA ACGCATCGGT
TCAACCGTTG AGGAGCTGAC CCGGAAAATA GAGCGGTTTG TGCGGAGCGC CTCCGCAACT
GCCGATGACC AATAA
 
Protein sequence
MRNKLQGAVL FIKRVAADAQ NRKLPGNMAT KKGLSKGILT FLNGRCRIFF IFVKLCTTCA 
ELQAKQRGFE QSVVNKEHTL IFLTGFSGSG KSTIGPLLAN SLGYEFVDLD QSIEQDTGKT
ITRIFAEEGE EFFRALELQR LSALVTQNNM IISLGGGALE NDLAYALIQK SGTLVYLKSP
SKTLARRLCN KTDRPLLRGE KGRKLSREEI EEKISTILAK REPRYESADI TVETDIKRIG
STVEELTRKI ERFVRSASAT ADDQ