| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1756 |
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| Symbol | |
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| ID | 6462905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1855874 |
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| End bp | 1857007 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727968 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_002018605 |
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| Protein GI | 194336811 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.185271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTCA GCCTCATTAC CACCGATCCG CACAGTTCAG CCCGGTGCGG TGTTCTTGAA
ACCAGCCACG GAACCATTCC TACGCCGGTT TTTATGCCGG TAGGCACCCG CGCAAGCGTG
AAATCAGTTG AACCTCACGA GCTTAGGGAA CTCAACGTTC ATATCATTCT GGCCAATACC
TATCACCTCT ACCTGAAACC GGGAAACGAG ATCCTGCAGA AAGCCGGGGG TGTCCACCGC
TTCATGAACT GGGATGGCCC GCTTCTGACC GACAGCGGTG GCTATCAGGT CTACTCACTC
TCCGACCTGC GCAAAATCAG CGAAGAGGGA GTCCTGTTCA AATCACACCT TGACGGTTCA
AAACAGCACT TCACCCCTGA AAATGTGATT GAGACCGAGC GCATCATCGG CAGCGACATC
ATGATGCCTC TCGATGAATG TCCACCCTCC ACCGCAGAAA AAGAGTATGT ACGCATCTCC
GGAGAGCTGA CCATTCGCTG GGCCGAACGG GCAAGAAAGC ATTTCACACT CACCTCTCCC
CTCTACGGCC ACGAGCAGTA CCTCTTCGGC ATTACGCAAG GGGGAATCCA TACCGACCTG
CGCACCAGCT CTACCAATGC GCTGGTTGAT CTTGATTTTG ACGGTTATGC CATTGGCGGC
ATGGCAGTCG GAGAACCGGC TGAAGAGATG TACCGTATCC TTGAGCTCTC TCACCCGCTG
CTGCCGGAGA AGAAACCGCG CTACCTCATG GGAGTCGGCA CACCTGAAAA CATTTTAAAC
GCTATCGAAC GCGGCATCGA TATGTTCGAC TGCGTCATCC CGACACGCGA AGGGCGCAAT
GGCAGGGTCT ATACCCGCCA GGGCAAGATG AACCTTCGCT CGGCAAAATA TTCAACCGAC
TTCAGCTCCA TCGACGAAGG ATTCGACAAC GAAGTCTGCC GAAACTATTC ACGCGCCTAC
CTCCGCCACC TGCTGAACGT CGGCGAGATT CTCGGTCTGA AACTCTGCAC CCTGCAAAAC
ATCTCCTTTT TCATGTGGCT TACCGCAACA GCACGAACGG AGATCCAGAA AGGCTCCTTC
ATGGAGTGGA AACAAGATTT TCTTGAACGA TTCAACTACA ATGACAACGC ATAA
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| Protein sequence | MKFSLITTDP HSSARCGVLE TSHGTIPTPV FMPVGTRASV KSVEPHELRE LNVHIILANT
YHLYLKPGNE ILQKAGGVHR FMNWDGPLLT DSGGYQVYSL SDLRKISEEG VLFKSHLDGS
KQHFTPENVI ETERIIGSDI MMPLDECPPS TAEKEYVRIS GELTIRWAER ARKHFTLTSP
LYGHEQYLFG ITQGGIHTDL RTSSTNALVD LDFDGYAIGG MAVGEPAEEM YRILELSHPL
LPEKKPRYLM GVGTPENILN AIERGIDMFD CVIPTREGRN GRVYTRQGKM NLRSAKYSTD
FSSIDEGFDN EVCRNYSRAY LRHLLNVGEI LGLKLCTLQN ISFFMWLTAT ARTEIQKGSF
MEWKQDFLER FNYNDNA
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