Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1754 |
Symbol | |
ID | 6462908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1853162 |
End bp | 1854229 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727966 |
Product | Cytochrome-c peroxidase |
Protein accession | YP_002018603 |
Protein GI | 194336809 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0761151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTC ACTTTCTTGT TGTCGCTCTT CTGGCGGCAG GTACTCTCTC TTCTTGTGCA AAAAAACCGC AACCAGAAGC AGCAACGCCG CCAGCCCCTG TTGCTGCTCC CCCCGCAGCG CCAGTGCTTC AGCCAAAGAC AGGTGAACCA GTTGCTCCTG TGGAAGCTCC GAAAGTGGCC GATCAGGCTA TGGTGGAGCT TGGCAAAAAG CTCTTTTTTG ATCCCCGGCT TTCAAAATCA GGCTTTATTT CCTGCAACTC CTGCCACAAT CTCAGCATGG GCGGCAGTGA CAATCTGAAA AGTTCGATCG GTCACAAATG GAAACAGGGG CCGATCAATT CACCGACAGT ACTTAATTCG AGTATGAACC TGGCCCAGTT CTGGGATGGG CGGGCCAAGG ATCTCAAGGA GCAGGCTGGT GGCCCAATCG CCAATCCGGG TGAAATGGGA TTTACCCACG ATCTTGCTGT TACGGTTTTG CAATCCATCC CGGCCTATGT CGATGAGTTC AAAAAAGTAT TCCAGGCCGA TACCATTGAT ATCGACAAGG TAACCACTGC TATCGCCGCT TTTGAAGAGA CACTGGTTAC ACCAAACGCC CGTTTCGACA AATGGCTCAG GGGCGATGAT GCTGCGATCA CAAAAGAAGA ACTTGCGGGA TATGAGCTTT TCAAGAGCAG TGGATGTACA GCCTGTCATA ATGGTGTTGC TCTTGGAGGA AACTCATTCC AGAAAATGGG CGCGGTGGAG CCTTACAAAA CAAAGAATCC TGCTTCAGGT CGCAGTGCTG TAACAAAAGA CGATGCTGAC CGCTTCAAAT TCAAGGTGCC GACTCTAAGG AATGTTGAAC TTACCTATCC CTATTTCCAT GATGCCGGGG CAGCAACACT TTCGAAAGCC GTTGAGGTGA TGGGCCAGAT CCAGTTGGGG AAAACGTTTA CCGTAGAGGA AAATGCCAAC ATTGTTGCAT TCCTGAAAAG CTTGACGGGC GATCAGCCGA AATTTGAGCT TCCGCAACTT CCGCCATCAT CCGATACAAC ACCGCTGCCG CAACCCTTCG GCAAATAA
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Protein sequence | MKTHFLVVAL LAAGTLSSCA KKPQPEAATP PAPVAAPPAA PVLQPKTGEP VAPVEAPKVA DQAMVELGKK LFFDPRLSKS GFISCNSCHN LSMGGSDNLK SSIGHKWKQG PINSPTVLNS SMNLAQFWDG RAKDLKEQAG GPIANPGEMG FTHDLAVTVL QSIPAYVDEF KKVFQADTID IDKVTTAIAA FEETLVTPNA RFDKWLRGDD AAITKEELAG YELFKSSGCT ACHNGVALGG NSFQKMGAVE PYKTKNPASG RSAVTKDDAD RFKFKVPTLR NVELTYPYFH DAGAATLSKA VEVMGQIQLG KTFTVEENAN IVAFLKSLTG DQPKFELPQL PPSSDTTPLP QPFGK
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