| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1682 |
|---|
| Symbol | |
|---|
| ID | 6463091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1790503 |
|---|
| End bp | 1791333 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642727898 |
|---|
| Product | phosphate binding protein |
|---|
| Protein accession | YP_002018535 |
|---|
| Protein GI | 194336741 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02136] phosphate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000225602 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGG ATGAAACCAT GATACCTAAA TTTCTGCTGT TTGTTGTTTT ACTTGCAGTT
ACCGCCACTA CGACAGCAAC TGCTGCCAGC AACTCCATTG TCCTTGACGG TTCAACAACC
GTCGGCCCTC TTGCAAAGAC TTTTGCTTCA TATTTCACTA AAAAATATGG AGTTCGTGTT
ACCGTGAGCG AGTCGGGCAG TGGCAATGGC GCCAAAAGCC TGATCAATGG TTCCTGTACC
ATTGCAGCCA TGTCTCGTGC CATGAAAGCG GCTGAAATAG CAGCGGCGAG GACAAAAGGG
GTCAATCCTG TTGCTCATGT TGTTGCACTT GACGGTCTTG CCATGATTGT TCATCCGGCA
AATCCGGTTC GTTCACTTTC GAAAGCCCAG ATCAGCAATA TCTATCGTGG AACCATTACC
AACTGGAGAG AGGTTGGAGG CCCCAACGCA CGCATTGTTG TTATCCAGCG TGAATCCAAC
AGTGGTACCC AGGAATCCTT CAAAGAGCTG GTTTCCGGAA AAGGGGTACA GATAACAGGG
AGTGCTGAAA CCCAGTCCAG TAATGGTTCG GTAAAGAGCA GGGTAAGCAC GACCCTTTCA
GCCATAGGCT TTGTTGGTCT TGGTTTCGTG GATCGTTCGG TAAAAGTTGT TGCAGTCAAC
GGGGTTCTTC CCACGTTATC AATGGTGAAA AATGGTACCT ATCCGGTAAC AAGGCCTCTC
TTCTTCTATA CGAATGGCCA GCCTGCGGGG TCGGTCAAAC AGTTTATTGA GCTGCCGAAA
ACAGCGGATG GAAAAAGGAT GATCACGGAG CTTGGTTTTA TCACTCGCTG A
|
|---|
| Protein sequence | MNQDETMIPK FLLFVVLLAV TATTTATAAS NSIVLDGSTT VGPLAKTFAS YFTKKYGVRV
TVSESGSGNG AKSLINGSCT IAAMSRAMKA AEIAAARTKG VNPVAHVVAL DGLAMIVHPA
NPVRSLSKAQ ISNIYRGTIT NWREVGGPNA RIVVIQRESN SGTQESFKEL VSGKGVQITG
SAETQSSNGS VKSRVSTTLS AIGFVGLGFV DRSVKVVAVN GVLPTLSMVK NGTYPVTRPL
FFYTNGQPAG SVKQFIELPK TADGKRMITE LGFITR
|
|---|
| |