Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1664 |
Symbol | |
ID | 6463129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1768610 |
End bp | 1770064 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642727881 |
Product | hypothetical protein |
Protein accession | YP_002018518 |
Protein GI | 194336724 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0854698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGC CAATCATCAT AACTGCGGTT GTTGTTGCGC TGCTTGCCGC CAGCTTCTAT TTTTTATTGA GGAAGAGTTC TGCCATTCCA CCCGTGGCGA TAACAGAAAC GGTGAATATC GATATCCCTC AGTCCACCTT TAATATTCCG ATCCGACTTG AAATCAAAAG CCTTTCTGAT TACCTGAACG CCAAAATCAC CGGTCAATTC CTGAACACAA CTCTCTTTCT TCAGGAATCA AGAAAAGAAA AAATTGCCCT GACGCTCACG AAAACAGGGC AGATTACCAT CAGATCAAAA GGCCGTGAGT TGGTTTGCAC CCTTCCCTTG ACTGTTAACG CAACGCTTCT CGACAGCCGA TTTGGAAAAA CACTCTCAAA ACTGGTTAAA CCATTTCGCA CGACTATTAT CCTGACTCTC TCAACACCAA TAGCTCTTGA CCGGGACTGG AAACTGAAAA CCAATTTCAA AATTAGACAC TATCGATGGG CAAGCGAACC GGTGCTCAAA ATCGGGCCTT TCAGAAAAAA CCTGAGGGAA ACACTCGATA ATGCCATCAG GCAGAACAAC CACCGCTTGA CTTCCATGGT CGATAAAGAG ATCAACAAGG CTGCATCATT AGAGAAGACG GTTGCCGGTG TCTGGCATGA CCTGCAAGAA CCCATTCTTA TTTACAGGAA CCCTGCGCCA ATATGGATGC GCTTTTCCTG CAATGATATC AAGGGGGATA TATCGCTGCA GCAGCAGGAT ATCATCTGCC TTGCCAGTGT AAAAGCGAAA ATGCTGATTG TCACCGATAC CACAACAGTG CTAAAACAGC ACCCCTTGCC TGATTTCAAA AAAATACCGG TGGAAGAGCT GCAGCGGAAG TCCGATGTTT TTATCTATGC CAACACCTCT TTTCATGAAA TTAATCAGCA ACTGAACGAA CTGCTGAAAG AAGCAGAGAT TTCTTCAAAG GGCTATACCA TCACCATCAA GGCAATAGAA GCCTATGCTT CCACAGAGGG ACTCAGCGTG GCTGTTGACA CGGAGGGTGA TCTCAAGGGG CGATTTTTTC TGACTGGCCA TCCCGTATTT GACCTCGCAA CCAAGAGACT GAATATTGTG GATTTTGACT TTGCAGTCAA CAGCAACAGC ATTCTTGTGA ACAGGGGGGA TGAGATACTG CATGATCTTC TCAAAAAACG AATCGCGTCG AAGCTGAATC TTGGCATGGA AACGCTGATA GCGAAATTAC CCTTCATCGT TCATCAAGCC ATTGCCAAGG AGAAGACAGG CAAAACAATC GACCTTATCA TGAACAATCT GGAGATCAAA CAGTGCGATA TTCTTATGGG TAAAGAGGGA GTGCACTTTA TCATCAATGC GAGCACTGAA ACAACTCTGA CACTCAAGGG CACCTCTAAA AACTGCTTTT TGATATATCA TCTGAACCAG CAATCCCTGC ATTGA
|
Protein sequence | MKKPIIITAV VVALLAASFY FLLRKSSAIP PVAITETVNI DIPQSTFNIP IRLEIKSLSD YLNAKITGQF LNTTLFLQES RKEKIALTLT KTGQITIRSK GRELVCTLPL TVNATLLDSR FGKTLSKLVK PFRTTIILTL STPIALDRDW KLKTNFKIRH YRWASEPVLK IGPFRKNLRE TLDNAIRQNN HRLTSMVDKE INKAASLEKT VAGVWHDLQE PILIYRNPAP IWMRFSCNDI KGDISLQQQD IICLASVKAK MLIVTDTTTV LKQHPLPDFK KIPVEELQRK SDVFIYANTS FHEINQQLNE LLKEAEISSK GYTITIKAIE AYASTEGLSV AVDTEGDLKG RFFLTGHPVF DLATKRLNIV DFDFAVNSNS ILVNRGDEIL HDLLKKRIAS KLNLGMETLI AKLPFIVHQA IAKEKTGKTI DLIMNNLEIK QCDILMGKEG VHFIINASTE TTLTLKGTSK NCFLIYHLNQ QSLH
|
| |