Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1653 |
Symbol | |
ID | 6463154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1746059 |
End bp | 1749040 |
Gene Length | 2982 bp |
Protein Length | 993 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642727870 |
Product | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor |
Protein accession | YP_002018507 |
Protein GI | 194336713 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAAA CCCCCGCAAG CAGCCAGAAA ATTAAAGCAA GTGAAGAGCA TGCACTCAAG AGTGAAGAAA AAATTCCTTT CCCGGTCGTC GGCATTGGCT CTTCGGCCGG TGGACTTGAA GCGCTCGAAC TGTTTCTGAA GCATGTTCCT TATCCCTGCG GCATGGCCTT TGTTATCATA CAGCACCTTG ACCCGACGCA CAAGGGAATT ATGGTTGAAC TGCTTCAGCG GGAAACGGCA ATGCCTGTCT GCCAGGTCAG CGACAATCTT GAAATCGAGC CGGATCATGT CTATCTGATT CCTCCGAACC AGGACATGTC GATACTGCAC GGGAAATTGT TTTTACTTGA CATGGTCAAA CCACGTGGTC TTCGACTTCC TATTGATTTC TTTTTTCGTT CAATGGCCGA TGACCTTAAA CAGCATTCCA TCGGCGTGAT TCTCTCTGGA ATGGGTTCCG ATGGCACACT TGGACTACGC GCCATCAAGG AAAAAGGTGG TGGAGTATTT GTACAGGATC CAGCTTCCGC GAAGTTTGAC GGAATGCCGC GAAGCGCTAT TGACGAAGGA CTGGCTGACG TTATCGTACC AGCAGAAAAT CTTCCCTCAA AAATCATTGC TTATGTAAAA CATCTTCCCG TCATCTTAAA ACCGGCCTTA ACCATCGAGG AGCAGGCACT GAGCTCGCTG AAAAAAATCA TTATTCTGTT TCGAACACAG ACCGGACATG ATTTTTCACT CTACAAGAAA AACACGATTT ATCGCCGCAT CGAACGGCGC ATGGGTATTC ACGAAATTGA AAAAATCTCT ACCTATGTCC ATTTTTTACA GACGAATCCC CAGGAAATCG AGCTGCTTTT CAAGGAGCTG CTGATAGGGG TAACCAGCTT TTTCCGGGAT CCTGATGCCT GGGAAATTCT TAAAAAAGAT GGCATACCCT CCATTCTCGC ATCCCGTCCA TCTGGCGGTA TTATTCGGGC CTGGGTGGCA GGATGTTCAA CAGGTGAAGA GGCCTATTCC CTCGCGATTG TCTTCAGAGA AGTCCTTGCA ACAACAAAGC ATCCCGGCAA TTTCAAGCTC CAGATCTTTG CAACAGACCT CGACAAAAAT GCCATTGAAA AAGCCCGAAC AGGAATCTAT CCATCCAATA TTACTGCTGA TGTTTCTGCG GAGCGTATCA GTCAATACTT TGAAAAAGAT GACCGGGGCT ACAGAATTAC AAGAGCGATT CGCGAAACCA TTGTCTTTGC TCCCCATAAC GTTATTATGG ATCCACCCTT CAGCAAGGTC GATATTCTCG TTTGCCGCAA TCTGCTGATT TACATGGAGC AAGAGCTGCA GAAAAAACTG ATCCCGTTAT TTCATTACAG CCTTAATCCC GGCGGAATCC TCTTTCTTGG AAGCGCTGAA ACAATCGGAT ACTGTGGCCA ACTGTTTCAG ACTCTTGACA GCAAGGCCCG TCTTTTCCGT CATATGCATC AGGCAGAGAG GGCTGAGTAT GTTGATTTCC CCGCATCTTT TACCCATCCT TTACACGACA GTTCAACTCT TCCGGTCACA CAGGGCAAAC CGATGACATC CGATCTCAAC CTGAGTACCA TATGCGATAA GCTCCTGCTC CAGTATTATA CTCCCGCAGC AGTACTGACC AATGAGCATG GCGACATTCT CTACATAAGC GGTCGTACAG GGAACTACCT CGAACCAGCA GCAGGAAAAG CAAACCTGAA CATCTTCGCA ATGGCAAGGG AAGGGATTGG CTATGAGCTG AATATTCTGA TCAGAAATGT GCTCCGCGAG AAAGGCGAGA TTTCCAAAAC GGGAGTGGCA GTCGGAACAA ACGGAGGAAC AAAAATCATT GACCTGACCG TCAGGTTGAT TGAAAAACCG GATTCCCCTA AAAACATGCT CATGATTGTT TTTACCGAAG TTGCAAAAAA AACAGCAGAA AATCTGGATC AGAATCCCGT TGCAGATTTC AATGACCGGA GGCTTGCCTC ACTTGCTGAA GAACTCAAAC AAGCAAAAGA GGAAATTATC ACCATACGTG AAGAGATGCA GACCTCGGAG GAGGAACTGA AAAGCACGAA TGAAGAGATG CAGTCAGCCA ATGAGGAGAT GCAGAGTACC AATGAAGAGT TAACCACATC AAAAGAGGAG ATGCAGTCGC TGAACGAAGA GCTGCAGACG GTTAACCATG AACTGCAATC AAAAGTGACT GACCTTTCAC AGGCCAACAA TGACATGAAA AACCTGCTGA ACAGCACGGA CATTGCAACA CTTTTTCTTG ATGATGAGCT CAACATACGA CGCTTCACCA ACCGGACATC ATCCATCATC AAACTCATTG CAAGCGATGT TGGACGTCCC ATAACCGATA TTGTTACCGA ACTGCAATAT CCTGCACTGC TTGAAGATGC CCGCGAGGTT CTTCATACTC TTGTTTTCAG TGAAAAACAG GTTTCTGCAA GTAACAATCG GTGGTTTAGC GTCAAGATCA TGCCCTATCG AACACAGGAA AACCGTATTA ACGGCCTGGT AATTACCTTT ACTGATATCA CTGTCGCCAA GAAACTCGAA ACAAGTCTGC GAGAGATTGA GAAGAGTTTC CGTTTTGTGA TTGACACCAT GCCTGTTGCG ATTATCGTTC ATCAGGCCGA AGGATGTATT ACAATGACAA ATCAAGAGGC CGAGCGAATT ACAGGAATTT CCATGAAAGA GATGCTCGGT AAAAATATTG CCGATCTTGG ATGGAAACTG CTCAAGGCAG ACGGCTCAGA ATTGCCTCCC GAGGAAAACC CTGTTGTGGA CGCATTGCGC TCCGGCAAGA CGATAAACGG AGTCGTTATC GGCATTATCC ACGCCCAGGA TCGCAAAACA CGATGGATTA AAATCAGTAA CTCGAACAGA TTACAAGATG AAGAGGACAA AAACAGCCAC CTCTTTACAA CATTTTTTGA AATAAATAAC CCGAATTCCT GA
|
Protein sequence | MTKTPASSQK IKASEEHALK SEEKIPFPVV GIGSSAGGLE ALELFLKHVP YPCGMAFVII QHLDPTHKGI MVELLQRETA MPVCQVSDNL EIEPDHVYLI PPNQDMSILH GKLFLLDMVK PRGLRLPIDF FFRSMADDLK QHSIGVILSG MGSDGTLGLR AIKEKGGGVF VQDPASAKFD GMPRSAIDEG LADVIVPAEN LPSKIIAYVK HLPVILKPAL TIEEQALSSL KKIIILFRTQ TGHDFSLYKK NTIYRRIERR MGIHEIEKIS TYVHFLQTNP QEIELLFKEL LIGVTSFFRD PDAWEILKKD GIPSILASRP SGGIIRAWVA GCSTGEEAYS LAIVFREVLA TTKHPGNFKL QIFATDLDKN AIEKARTGIY PSNITADVSA ERISQYFEKD DRGYRITRAI RETIVFAPHN VIMDPPFSKV DILVCRNLLI YMEQELQKKL IPLFHYSLNP GGILFLGSAE TIGYCGQLFQ TLDSKARLFR HMHQAERAEY VDFPASFTHP LHDSSTLPVT QGKPMTSDLN LSTICDKLLL QYYTPAAVLT NEHGDILYIS GRTGNYLEPA AGKANLNIFA MAREGIGYEL NILIRNVLRE KGEISKTGVA VGTNGGTKII DLTVRLIEKP DSPKNMLMIV FTEVAKKTAE NLDQNPVADF NDRRLASLAE ELKQAKEEII TIREEMQTSE EELKSTNEEM QSANEEMQST NEELTTSKEE MQSLNEELQT VNHELQSKVT DLSQANNDMK NLLNSTDIAT LFLDDELNIR RFTNRTSSII KLIASDVGRP ITDIVTELQY PALLEDAREV LHTLVFSEKQ VSASNNRWFS VKIMPYRTQE NRINGLVITF TDITVAKKLE TSLREIEKSF RFVIDTMPVA IIVHQAEGCI TMTNQEAERI TGISMKEMLG KNIADLGWKL LKADGSELPP EENPVVDALR SGKTINGVVI GIIHAQDRKT RWIKISNSNR LQDEEDKNSH LFTTFFEINN PNS
|
| |