| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1644 |
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| Symbol | |
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| ID | 6463181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1733251 |
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| End bp | 1734708 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727860 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002018498 |
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| Protein GI | 194336704 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.431647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAACAG ATCACAGCAC ACCATCACCC CTGCTGAACA AACAAACCGG TGCAGGAGAA
AACCGATCAC AAAAAGGAGT ACGCATTTTT CTTTCGGCCA CTCTCCTTGG CTTTGTGCTC
ATCCTGCTTA TCCAGGCCGA TCTTGTGCTG ATCAGTTTTC GGTCACTCTT TACCGCAACA
GCGCTCATAC TCTCTGCACC GAAAGCATTC CAGGAGATCT TCAGCACCGA GATCCTTGAA
TTCTGGATAG CAGCCCTCTA CCTTGTTGCC GTTCCGATCG TTCTGCTGCT CATTGCCCGA
AAAAGATCAT TACGCAAGAA AACACCTGAA CTCCAAAAAA GCGAAGAACT GAGCATCGGC
AAAATCAGCC TCAGGGCCTT CATGCGCCAC ACCATAGCTC TCTACGCTTC AGCCATTATT
TTTCTCCTCT ACTCGGCAGC ATTCCTTGCT CCCTTCATCG CCCCCTTCAG CCCCTATGAC
CAGCAGGATT TTCTCGTCAC CGCCTATCAG CCACCTCTCT CACGACTTGA GGCACTGATA
CTCCGCCAGC CAAAAAACCT GATCATCCCC CTGCAGAAAG GGAGCGGAAC AACCGTTCAA
CTGGCCAACA CTCTCATCAG CGATTTTCAG CTTCTGAAAA CACGCAACGA ACCCAACGCC
ATCCGATTTG TCAACGAATA TCGCAGAGAG GGCAACAACG TCATCTACCG TCAGGGAATA
CGCACCAAAA CCATCTCCCT CGCAGAGCTG GCTGGAGGCG GAAGAAGCAA CATCGCCGTC
ACCCGTACCT TCATCCTTGG CACAGACCAG TATGGACGCG ACATTCTCAG CCGCGTCATC
TACGGCTCAA AAATTTCACT CTCTATCGGC TTTCTTGTTG TTTTAATCTC CGTCACCCTC
GGCACCATAA TCGGAGTATC ATCAGGCTAT TTCGGGGGCT GGATCGACGC ACTCATGATG
AGGATCGTTG ATATCCTTAT CGCCTTTCCG GCACTCTTTC TCATCCTCAT CATCATCGCC
ACCTTCGGCA ACTCCATCTA CCTCATCGTC ATCACCCTCT CCTTTACCGG CTGGATGGGT
GTCGCAAGAA TTGTCCGCAG TCAGGTACTC TCGCTCAAAG AACAGGAATT CATCCTCGCG
GCAAAATCAC TCGGCCTCTC CAGCATGAGA ATCATCTTCC GCCACCTTGC GCCCAACACC
CTCACCCCGG TCATCATAGC GGCAACGCTG CGGATCGGAA GCATTATCCT GACAGAAGCC
GGACTCTCCT TTCTCGGCCT CGGTGTTCAG CCGCCAACAC CAAGCTGGGG CAACATTATC
AACGAAGGAC GCGACAGCCT CCTGAACTAC TGGTGGATAT CAACCTTCCC CGGTATTGCC
ATTCTGACCA CCGTGGTCTG CTTCAACCTC ATCGGCGACG GCGTCCGCGA TGCCCTCGAC
CCCAGAATGA GAGGATAG
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| Protein sequence | MKTDHSTPSP LLNKQTGAGE NRSQKGVRIF LSATLLGFVL ILLIQADLVL ISFRSLFTAT
ALILSAPKAF QEIFSTEILE FWIAALYLVA VPIVLLLIAR KRSLRKKTPE LQKSEELSIG
KISLRAFMRH TIALYASAII FLLYSAAFLA PFIAPFSPYD QQDFLVTAYQ PPLSRLEALI
LRQPKNLIIP LQKGSGTTVQ LANTLISDFQ LLKTRNEPNA IRFVNEYRRE GNNVIYRQGI
RTKTISLAEL AGGGRSNIAV TRTFILGTDQ YGRDILSRVI YGSKISLSIG FLVVLISVTL
GTIIGVSSGY FGGWIDALMM RIVDILIAFP ALFLILIIIA TFGNSIYLIV ITLSFTGWMG
VARIVRSQVL SLKEQEFILA AKSLGLSSMR IIFRHLAPNT LTPVIIAATL RIGSIILTEA
GLSFLGLGVQ PPTPSWGNII NEGRDSLLNY WWISTFPGIA ILTTVVCFNL IGDGVRDALD
PRMRG
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