Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1631 |
Symbol | ddl |
ID | 6463210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1718473 |
End bp | 1719555 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642727847 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_002018485 |
Protein GI | 194336691 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACGTA TTACAGTTGC TCTCATTTTT GGAGGCAGGT CAACCGAACA CGAAATATCA ATCATCTCTG CAAAATCAAT AGCAGCCAAT ATCAGCGCCG AACGTTACAA GGTTATTCCG CTCTACATTA CACATCAGGG AACCTGGCTC TGTGAGGGCA TTGCCCGCGA CATTCTGAAC CTTGACCTCT CCGCTCTTTT GAGAAACTCA TCACCTGAAG CAGCAGCGAT GGCGCTTGAC AGGATGGTTG AAGAGGCGGA GCAGAAACCC TTCAACCTCG ATTTCAGGGC TATCGGCATT GAAGTGGCAT TTCTGACGCT TCATGGCACC TATGGAGAAG ATGGCCGCAT CCAGGGCTTT CTGGATACCT GCAACATTCC CTATACAGGC TGCGGTGTAC TGGCATCAGC GCTCACTATG GATAAAGCGC TCACCAAACT CTGTGTTGCA GATGCAGGCA TTGCTGTTGC TCCATCCATA ACGCTTCTCA GTGCCGAGTA CCATGCCGAT ACGGAAAAAG TTCACTCCCG GATCGAAGAG AAGTTTATCT ATCCATTTTT TGTCAAACCG GCAAACCTCG GCTCCTCAAT TGGAATCTCA AAGGTGCATC ACCGGGAACA ACTCCCTGCA GCCCTAAAAA GCGCCTGTTC ACTCGACTCA AAAATAGTGG TTGAAAAAGC AATCACAGGG CGTGAAATTG AGGTTGCTGT ACTTGGCAAT GATGAACCGG AAGTCTCCGT TTGCGGCGAA ATCGAACCCG GCAGCGATTT CTATGACTAT CATGATAAAT ACATTCACAA CAGTGCAAAA CTGTTTATTC CGGCACGCAT TCCCGACGAA ATGCAGAGCG AGGTCAGGAG CATTGCACTC AAGGCATACA AGGCGCTGGG ATGCAGGGGT ATGTCGAGAA TAGACTTTTT TGTTGACGAA AAGAGGGGAA CCATCGTCCT CAATGAAGTC AATACCATTC CCGGCTTCAC CGATATCAGC ATGTTTCCTC GACTCATGGC TGCAAGCGGA CACTCTTTTC CTGAACTTGC AGAGCGATTG CTGCAGCTTG CACTGGAAAC CCTGCGACCA TGA
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Protein sequence | MPRITVALIF GGRSTEHEIS IISAKSIAAN ISAERYKVIP LYITHQGTWL CEGIARDILN LDLSALLRNS SPEAAAMALD RMVEEAEQKP FNLDFRAIGI EVAFLTLHGT YGEDGRIQGF LDTCNIPYTG CGVLASALTM DKALTKLCVA DAGIAVAPSI TLLSAEYHAD TEKVHSRIEE KFIYPFFVKP ANLGSSIGIS KVHHREQLPA ALKSACSLDS KIVVEKAITG REIEVAVLGN DEPEVSVCGE IEPGSDFYDY HDKYIHNSAK LFIPARIPDE MQSEVRSIAL KAYKALGCRG MSRIDFFVDE KRGTIVLNEV NTIPGFTDIS MFPRLMAASG HSFPELAERL LQLALETLRP
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