| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1620 |
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| Symbol | aspS |
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| ID | 6463231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1707460 |
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| End bp | 1709265 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727836 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_002018474 |
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| Protein GI | 194336680 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0865646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG CTGCAGGGAG CACGCAGACT CTGAAAAACC GGTTCCGCTC AGATTATTGC
GGATTACTCT GTCCGGAGCG TGAGCATGGC TCCGTCAGGC TTGCCGGCTG GGTTCACAGA
AAACGTGATC ATGGGGGCCT TATATTTATT GATCTGAGGG ATCATACCGG CATCAGCCAG
CTTGTTATTC AGCCTGAGCA GCAGGAGCTC TTCGCAAAAG CTGAGCAATT GCATGTGGAA
TCGGTTATCT GTATTGAGGG TGTTGTGGTT CTTCGCGCTC CGGGAGCCAT CAATTCCCGT
CTCGCATCCG GCGAGATTGA GGTGGTTGTC AGTCAGATTA CGGTCGAAAG TAATGCACAT
CCATTACCCT TTCCGGTAGC CGACGAGGTG GTGACTTCGG AAGAGCTGCG GCTGAAATAC
CGTTTCATTG ATCTGCGCCG TGAAAAAATT CATGAAAATA TCATTTTTCG CAGCCGATTG
ACTGCTGCTA TACGCCGCTA TCTTGAAGAA CAGGATTTTA TCGAAATCCA GACACCGATT
CTTACTTCCA GCTCGCCAGA GGGTGCACGC GACTTTCTTG TGCCAAGCCG CCTTCATCCG
GGTAAATTCT ATGCACTGCC CCAGGCGCCC CAGCAGTTCA AGCAATTGCT CATGGTATCA
GGTTTTCCCC GCTACTTCCA GATAGCCCCC TGTTTCCGTG ATGAAGATGC CCGTGCTGAC
CGCAGCCCCG GTGAGTTTTA TCAGCTCGAT ATGGAGATGG CCTTCATTGA GCAGAACGAT
CTCTTTACGA TCCTTGAAGG GATGATTGAG CATCTTACCC GCACCATGTC GCACAAGCGG
ATCACGCAAT TTCCCTTTCC GAGAATCAGT TATAAAGAGG TGATGAACCG CTTCGGTACC
GACAAACCCG ATTTGCGGAT TCCTCTCGAA ATCAGCGATG TTACGCCACT CTTTGTTGGT
TCAGCCTTCA AAGTCTTTGC AAATAGTACG GTAGAAGGCT CCTGCGTCAA GGCACTTGTT
GTCAAGGGTC GCGGCAATGA ATCGAGGCTC TTTTACGACA AGGCAGAGAA ACGCGCCAAA
GAGCTTGGTT CAGGCGGTCT TGCCTATATC CAGTTCAGGG AAGAGGGACC AAAAGGGCCT
GTGGTCAAGT TTCTTTCCGA AGCGGATCTT GCTACGCTCA AAGAGCACCT TGGCCTTGAG
ACCGGTGATG TGGTCTTTTT CGGGGCAGGG AAGTGGGAAT CGACCTGCAA GATCATGGGC
GGTATGAGAA CCTACTTCGG CGATCTCTTT ACGCTCGACA AGGATGAACT CTCCTTCTGC
TGGATCGTTG ATTTTCCCAT GTACGAGTAC AACGAGGAGG CCAAAAAGAT CGACTTTTCA
CACAACCCCT TCTCCATGCC GCAGGGAGAG ATGGAGGCGC TTGAAACCAT GCCGCCTCTC
GATATTCTTG CCTACCAGTA CGATATCGTC TGCAATGGCA TTGAGCTGTC AAGCGGCGCC
ATCCGCAACC ACAAGCCGGA GATCATGTAC AAGGCTTTTG GTATTGCCGG ATACAGCCGC
GAAGAGGTTG ACGCACGCTT TGGTCACATG ATCGAAGCCT TCAAGCTTGG CGCACCACCG
CACGGAGGAA TTGCTCCCGG TCTCGATCGC CTCGTCATGA TCCTCTGCGA CGAGCAGAAC
ATCCGTGAGG TCATCGCCTT CCCAATGAAC CAGCAGGCGC AGGATCTCAT GATGGGCTCA
CCATCAGAGG TGACGCCCGT TCAGCTCAAG GAGCTGCATC TGAAGGTGGA GTTACCGAAA
AAATGA
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| Protein sequence | MSKAAGSTQT LKNRFRSDYC GLLCPEREHG SVRLAGWVHR KRDHGGLIFI DLRDHTGISQ
LVIQPEQQEL FAKAEQLHVE SVICIEGVVV LRAPGAINSR LASGEIEVVV SQITVESNAH
PLPFPVADEV VTSEELRLKY RFIDLRREKI HENIIFRSRL TAAIRRYLEE QDFIEIQTPI
LTSSSPEGAR DFLVPSRLHP GKFYALPQAP QQFKQLLMVS GFPRYFQIAP CFRDEDARAD
RSPGEFYQLD MEMAFIEQND LFTILEGMIE HLTRTMSHKR ITQFPFPRIS YKEVMNRFGT
DKPDLRIPLE ISDVTPLFVG SAFKVFANST VEGSCVKALV VKGRGNESRL FYDKAEKRAK
ELGSGGLAYI QFREEGPKGP VVKFLSEADL ATLKEHLGLE TGDVVFFGAG KWESTCKIMG
GMRTYFGDLF TLDKDELSFC WIVDFPMYEY NEEAKKIDFS HNPFSMPQGE MEALETMPPL
DILAYQYDIV CNGIELSSGA IRNHKPEIMY KAFGIAGYSR EEVDARFGHM IEAFKLGAPP
HGGIAPGLDR LVMILCDEQN IREVIAFPMN QQAQDLMMGS PSEVTPVQLK ELHLKVELPK
K
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