| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1613 |
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| Symbol | |
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| ID | 6463256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1699517 |
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| End bp | 1702675 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727828 |
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| Product | beta-phosphoglucomutase family hydrolase |
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| Protein accession | YP_002018468 |
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| Protein GI | 194336674 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase
[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.885412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA TCTTCAAAGG CGCAATTTTC GATCTTGATG GGGTGATCAC TGGCACGGCA
AAAGTACACA GCCTTGCATG GGAATCGATG TTTAATTACT TCCTCAAAAA TTATGCGGAA
TTAAACGACG AAACGTACTT CCCTTTCGAC CCGGCCCACG ACTATCACAA GTATGTAGAC
GGCAAACCAA GAATGGAGGG AGTCAAAAGC TTTCTCGCTT CACGTGACAT TGAGCTCCCT
TATGGCGAAC TGGACGATAT CCCGGAAAAA GATACCGTCT GCGGTCTTGG CAACCGCAAA
AACAGCCTTT TCACCGAAAT TCTCATCAAG GAAGGGCCTG AGGTCTATAC CTCATCAATT
GACCTGATCC ACGTCCTCAT CTCAAAGGGG ATTAAAATTG GTATCGCTTC ATCAAGCTGC
AACTGCCAGC TCATCCTGAA GCTTGCCAAA CTTGAACATC TTTTTGAGAC CCGTGTGGAT
GGAGAGGTCT CCATTCAGCT CGGCCTGAAG GGAAAGCCCA ATCCTGATAT TTTTATCATG
GCGGCCAAAA ACCTCGGTCT GGAACCACAC GAATGTGTGG TTGTTGAGGA TGCCATTTCC
GGCGTTCAGG CTGGCTCCCG AGGCAATTTC GGTCTGGTGC TCGGTATTGC CCGTGACATC
GAAGGATCGA AACTGAAGGA GCAGGGCGCT GATATTGTTG TCAGTGACCT TGGCGAAATC
ACCTATGAAG AGATTGAGCG CTGGTTCAAG AAGGGACTTG AGTTTGACGG GTGGAACCTG
ACCTATACCG ATTATTCTGC CAAAGATGAA AAACTTCGTG AGACACTGAC CTCGTGCGGC
AATGGCTACC TTGGCGTAAG AGGAGCCTAT GAAAGCTCTT CCTGTACCAA CCATCACTAT
CCCGGCACCT ACATTGCCGG AATTTTCAAC AGGGTACCCT CGGAGGTTCA TGGTCAAACC
GTTTTCAACA ATGATTTTGT CAATACCCCA AATTGGCTTC CCATCGAATT CAGGATAGGG
GGTGGAGAGT TCATTGAACC ATTGGGGCAA AAGATACTCA GCTATCGCCA GAACATGAGT
CTGCGCAACG GCCTCATGGA ACGGGATCTC GTCATTCAGG ACAACCTTGG AAGAATAACA
AGCATCAGCA GTCGCCGATT TGCGAGCATG GACGATCCGC ACCGCTGCGC GCTCAAGTTC
ACCCTGAAAC CGGTCAATTA CAGTGCGGAA ATAGAGTTCC GCTCAGCAAT TGACGGAAGG
ATTAAGAACA AGAATGTTGC GCGATACAAT GAGCTGACAA ACGATCATCT GGAGCAGGTG
GAAAGTCTCT CGGAAGATCA GCTCATGCTG CTTCATGTAC GCACCAATGT ATCGCATTAC
GATATTGTGA CCGGCACAAA AACGAGAATT TTATGCCATG GCAAGCCTGC GGTTGTCGAA
AGGGTAACAT TGAACAACAA TCGCTACATC GGAGAGCTCT TCAAACTCTC GCTCAATCCG
AACAAAGGCT GCACCATTGA AAAACTGGCC GCCATTCATA CCTCTCTTGA TGCAAAAAGT
GTCGATCCAC TGAAAGCCAC CCGCCTTTCC CTGCAAAGCG AAGATTCTTT CGATTCGCTC
TTCAAGGCGC ATAATGATGC CTGGGAGAAA ATATGGAAAA AGGCTGATCT GGTTATTGAG
GGCGACCGCT ACAGCCAGAA ATTGCTCCGC CTGCACACCT ATCACATGAT GTGCACCGCT
TCGCCGCACA ATCCCTCCAT TGATGCCGGT ATGCCGGCCC GTGGACTGAA CGGTGAGGCC
TACCGTGGAC ATATTTTCTG GGATGAGATC TTTATTCTGC CCTTTTTCAA CCGCCACTTC
CCCGAGATCT CAAAGGCTCT TCTGCTCTAC CGATACAATC GGCTTGATGC AGCAAGGGAG
TATGCGAGTG AAAATGGCTA CAAGGGAGCA ATGTTCCCAT GGCAGACTGC CGATGATGGC
CGCGAAGATA CGCAGATCAT CCATTTTAAC CCGAAGAGCG GTAGCTGGGG TCCTGACCTC
AGCCGTCTGC AGCGACATGT TTCTATTGCG GTCTTCTACA ATGTCTGGCG CTACATCTAT
GACACCGACG ACACGCAGTT CCTCAATGAG TATGGCGCTG AACTGATGTT TGAAATTGCT
CGTTTCTGGG CTTCGATTGC CTCATATTCG ACCGAGAGCG GCAAGTACCA TATTGAAGGG
GTAATGGGGC CTGATGAATT TCATGAAGCG CTGCCCGATA GTGGCAAAGA GGGACTGAAA
GACAATGCCT ACACCAACAT CATGGCGATC TGGCTCTTCG ACAAAGCCGC TGAAATCGGT
GATAAAATTG ATCCTCTTGT GCTTGAAGGA TTGATGTCGA AGATTGATCT TGACCTTGAT
GAGCTGAAGA AATGGCGGGA AATCAGCAGC CACATGAATA TCCTGATTGA TCAGGATGGT
GTACTGGAGC AGTTTGAAGG ATACAAGAGC CTTAAAGAGC TTGACTGGCG TCACTACCGC
TCACGGTACG GCAACATCCA CCGTATGGAC AGGATACTGA AAGCCGAGGG TGATTCGCCC
GATCTGTACA AGGTTGCCAA ACAACCTGAT GTTTTGATGA CCTTTTATAC GCTCTCACCC
GGTGAGGTAG CCGAGTTGCT CGAAAAAATC GGGTATACGG TACCCGATGC CCTGACCTTT
GTCAGAAACA ATTATGCCTA TTATGAACCA CGGACAAGTC ATGGTTCAAC CTTGAGCAAG
GTGGTTCACA GCATCATCTC AAGCTATCTG GAAGATGGTC ATGAAATGGC ATGGAAATGG
TTCTCCGAAG CCCTCAAGAG CGATATTCAG GATACCCAGG GCGGCACAAC CCAAGAGGGC
ATTCACTGTG GCGTCATGGC TGGAACGCTC GACACTGTTA TTCGTTATTT TGCCGGTATT
TCATTCTATA ACGAAAAACT CAATGTGCAT CCAAACCTGC CTGAGCAGTG GAAAAAGCTT
TCACTAAGCG TCTGTTTCAG GAAAAATCGC TATATCATGA CCATTGCACC GAATGATATC
GTTGTCACGC TGGTCGAAGC CGAGGGAGAT GAAGCCCTCG CATGTATTGC CGGACAGCAT
ATCACCCTCA GGAAAGGAGT TGCATACCAC TCCGCTTGA
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| Protein sequence | MSNIFKGAIF DLDGVITGTA KVHSLAWESM FNYFLKNYAE LNDETYFPFD PAHDYHKYVD
GKPRMEGVKS FLASRDIELP YGELDDIPEK DTVCGLGNRK NSLFTEILIK EGPEVYTSSI
DLIHVLISKG IKIGIASSSC NCQLILKLAK LEHLFETRVD GEVSIQLGLK GKPNPDIFIM
AAKNLGLEPH ECVVVEDAIS GVQAGSRGNF GLVLGIARDI EGSKLKEQGA DIVVSDLGEI
TYEEIERWFK KGLEFDGWNL TYTDYSAKDE KLRETLTSCG NGYLGVRGAY ESSSCTNHHY
PGTYIAGIFN RVPSEVHGQT VFNNDFVNTP NWLPIEFRIG GGEFIEPLGQ KILSYRQNMS
LRNGLMERDL VIQDNLGRIT SISSRRFASM DDPHRCALKF TLKPVNYSAE IEFRSAIDGR
IKNKNVARYN ELTNDHLEQV ESLSEDQLML LHVRTNVSHY DIVTGTKTRI LCHGKPAVVE
RVTLNNNRYI GELFKLSLNP NKGCTIEKLA AIHTSLDAKS VDPLKATRLS LQSEDSFDSL
FKAHNDAWEK IWKKADLVIE GDRYSQKLLR LHTYHMMCTA SPHNPSIDAG MPARGLNGEA
YRGHIFWDEI FILPFFNRHF PEISKALLLY RYNRLDAARE YASENGYKGA MFPWQTADDG
REDTQIIHFN PKSGSWGPDL SRLQRHVSIA VFYNVWRYIY DTDDTQFLNE YGAELMFEIA
RFWASIASYS TESGKYHIEG VMGPDEFHEA LPDSGKEGLK DNAYTNIMAI WLFDKAAEIG
DKIDPLVLEG LMSKIDLDLD ELKKWREISS HMNILIDQDG VLEQFEGYKS LKELDWRHYR
SRYGNIHRMD RILKAEGDSP DLYKVAKQPD VLMTFYTLSP GEVAELLEKI GYTVPDALTF
VRNNYAYYEP RTSHGSTLSK VVHSIISSYL EDGHEMAWKW FSEALKSDIQ DTQGGTTQEG
IHCGVMAGTL DTVIRYFAGI SFYNEKLNVH PNLPEQWKKL SLSVCFRKNR YIMTIAPNDI
VVTLVEAEGD EALACIAGQH ITLRKGVAYH SA
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